{"@type": "dcat:Dataset", "accessLevel": "public", "bureauCode": ["005:18"], "contactPoint": {"fn": "Read, Quentin D.", "hasEmail": "mailto:quentin.read@usda.gov"}, "description": "<p dir=\"ltr\">This dataset contains all data and code necessary to reproduce the analyses, tables, and figures presented in the associated manuscript.</p><p dir=\"ltr\">The following files are included:</p><ul><li>Fumonisin_Bioassay_Rice_Trial_1.xlsx (and Trial_2.xlsx, Trial_3.xlsx): results from the three experimental runs of the fumonisin bioassay</li><li>Seedling_Disease_Assay_Trial_1.xlsx (and Trial_2.xlsx, Trial_3.xlsx): results from the three experimental runs of the seedling growth and disease assay</li><li>fumonisin_bioassay.Rmd: RMarkdown notebook with annotated R code needed to analyze the fumonisin bioassay data</li><li>fumonisn_bioassay.html: rendered HTML output of the fumonisin bioassay notebook</li><li>seedling_disease_assay.Rmd: RMarkdown notebook with annotated R code needed to analyze the seedling disease assay data</li><li>seedling_disease_assay.html: rendered HTML output of the seedling disease assay notebook</li><li>data_description.pdf: metadata document with column descriptions for each of the spreadsheets</li></ul><p dir=\"ltr\">The following software and package versions were used:</p><ul><li>R version 4.3.1</li><li>CmdStan version 2.33.1</li><li>R packages:</li><li><ul><li>brms version 2.20.4</li><li>cmdstanr version 0.5.3</li><li>emmeans version 1.8.9</li><li>tidybayes version 3.0.4</li><li>bayestestR version 0.13.2</li></ul></li></ul><p><br></p>", "distribution": [{"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/45363376", "format": "xlsx", "mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet", "title": "Seedling_Disease_Assay_Trial_1.xlsx"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/45363385", "format": "xlsx", "mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet", "title": "Seedling_Disease_Assay_Trial_2.xlsx"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/45363391", "format": "xlsx", "mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet", "title": "Seedling_Disease_Assay_Trial_3.xlsx"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/45363481", "format": "Rmd", "mediaType": "text/plain", "title": "seedling_disease_assay.Rmd"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/45363484", "format": "Rmd", "mediaType": "text/plain", "title": "fumonisin_bioassay.Rmd"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/45363493", "format": "html", "mediaType": "text/html", "title": "seedling_disease_assay.html"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/45363496", "format": "html", "mediaType": "text/html", "title": "fumonisin_bioassay.html"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/45435703", "format": "xlsx", "mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet", "title": "Fumonisin_Bioassay_Rice_Trial_2.xlsx"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/45435706", "format": "xlsx", "mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet", "title": "Fumonisin_Bioassay_Rice_Trial_3.xlsx"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/45435709", "format": "xlsx", "mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet", "title": "Fumonisin_Bioassay_Rice_Trial_1.xlsx"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/45435805", "format": "pdf", "mediaType": "application/pdf", "title": "data_description.pdf"}], "identifier": "10.15482/USDA.ADC/25504900.v1", "keyword": ["Fusarium verticillioides", "denitrification", "disease", "fumonisin", "fungi", "nitrogen cycle", "software code", "virulence"], "license": "https://creativecommons.org/publicdomain/zero/1.0/", "modified": "2026-01-23", "programCode": ["005:040"], "publisher": {"@type": "org:Organization", "name": "Agricultural Research Service"}, "spatial": "{\"type\": \"Point\", \"coordinates\": [-83.35804, 33.92859]}", "temporal": "2018-06-01/2019-06-30", "title": "Data and code from: Denitrification genes play minor roles in fumonisin production and virulence in <i>Fusarium verticillioides</i>"}