{
  "@type": "dcat:Dataset",
  "accessLevel": "public",
  "bureauCode": [
    "005:18"
  ],
  "contactPoint": {
    "fn": "Piccolo, Brian",
    "hasEmail": "mailto:bdpiccolo@uams.edu"
  },
  "description": "<p>Data and supplemental figures for manuscript titled \"Net release and uptake of xenometabolites across intestinal, hepatic, muscle, and renal tissue beds in healthy conscious pigs.\" We used a catheterized conscious pig model to estimate inter-organ flux of xenometabolites, derivatives, and bile acids using LC/MS. Female pigs (n=12; 2-3 months old; 25.6 ± 2.2 kg) had surgically-implanted catheters across portal-drained viscera (PDV), splanchnic area (SPL), liver, kidney, and hindquarter muscle. Overnight fasted arterial and venous plasma was collected simultaneously in a conscious state and stored at -80°C. Thawed samples were analyzed by liquid chromatography-mass spectrometry. Plasma flow was determined with para-aminohippuric acid dilution technology and used to calculate net organ balance for each metabolite. This repository contains the LC/MS data and supplemental figures for the submitted manuscript. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: Organ Net Balance Data for Mercer et al..</p> <p>File Name: Mercer et al LCMS XM Organ Flux Data.xlsx</p><p>Resource Description: Calculated net balances for LC/MS data from Mercer et al.  </p></li><br><li><p>Resource Title: LC/MS data for Mercer et al..</p> <p>File Name: Mercer et al LCMS XM raw data.xlsx</p><p>Resource Description: LC/MS peak area data for xenometabolites in Mercer et al.</p></li><br><li><p>Resource Title: Mercer et al Supplemental Figure 2.</p> <p>File Name: Mercer et al Fig S2.pdf</p><p>Resource Description: Supplemental Figure 2 for Mercer et al manuscript: Absolute differences of xenometabolites from catheter ports in conscious overnight-fasted female pigs (n=12).    Sampling sites included arterial, venous, renal, portal, and hepatic placed catheters.  </p></li><br><li><p>Resource Title: Mercer et al Supplemental Figure 1.</p> <p>File Name: Mercer et al Fig S1.pdf</p><p>Resource Description: Supplemental Figure 1 for Mercer et al manuscript: Supplemental Figure 1: Inter-organ flux of all xenometablites in conscious overnight-fasted female pigs (n=12).  A negative flux reflects net uptake (flux < 0; indicated by bottom arrow) by the organ, whereas a positive flux reflects a net release (flux > 0; indicated by top arrow) by the organ. Plasma flow measurements were determined with the para-aminohippuric acid dilution method, and were used along with metabolite concentrations to calculate flux (see Methods). R at top of arrow indicates ‘Release’, while U indicates ‘Uptake’. </p></li><br><li><p>Resource Title: Supplemental Table 1 for Mercer et al..</p> <p>File Name: Mercer et al Table S1.xlsx</p><p>Resource Description: Mercer et al Supplemental Table 1: Raw differences of identified xenometabolites from port samples in conscious adult female pigs (n=10-12).</p></li></ul><p></p>",
  "distribution": [
    {
      "@type": "dcat:Distribution",
      "downloadURL": "https://ndownloader.figshare.com/files/44528081",
      "format": "xlsx",
      "mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
      "title": "Mercer et al LCMS XM Organ Flux Data.xlsx"
    },
    {
      "@type": "dcat:Distribution",
      "downloadURL": "https://ndownloader.figshare.com/files/44528084",
      "format": "xlsx",
      "mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
      "title": "Mercer et al LCMS XM raw data.xlsx"
    },
    {
      "@type": "dcat:Distribution",
      "downloadURL": "https://ndownloader.figshare.com/files/44528087",
      "format": "pdf",
      "mediaType": "application/pdf",
      "title": "Mercer et al Fig S2.pdf"
    },
    {
      "@type": "dcat:Distribution",
      "downloadURL": "https://ndownloader.figshare.com/files/44528090",
      "format": "pdf",
      "mediaType": "application/pdf",
      "title": "Mercer et al Fig S1.pdf"
    },
    {
      "@type": "dcat:Distribution",
      "downloadURL": "https://ndownloader.figshare.com/files/44528093",
      "format": "xlsx",
      "mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
      "title": "Mercer et al Table S1.xlsx"
    }
  ],
  "identifier": "10.15482/USDA.ADC/1518604",
  "keyword": [
    "ARS",
    "NP107",
    "data.gov",
    "inter organ balance",
    "metabolomics",
    "pig model",
    "tissue flux",
    "xenometabolite"
  ],
  "license": "https://www.usa.gov/publicdomain/label/1.0/",
  "modified": "2024-02-13",
  "programCode": [
    "005:040"
  ],
  "publisher": {
    "@type": "org:Organization",
    "name": "Agricultural Research Service"
  },
  "title": "Data from: Net release and uptake of xenometabolites across intestinal, hepatic, muscle, and renal tissue beds in healthy conscious pigs"
}