gov.noaa.nodc:0289357 eng utf8 dataset NOAA National Centers for Environmental Information ncei.info@noaa.gov https://www.ncei.noaa.gov/contact HTTPS NOAA Contact Information Information for contacts at NCEI. information custodian 2026-05-07T13:17:07Z ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data ISO 19115-2:2009(E) NCCOS Assessment: Fertilization cross results examining genetic relatedness impact on successful reproduction in three species of reef building corals in the Florida Reef Tract in 2019 and 2022 (NCEI Accession 0289357) 2024-03-07 publication 2024-02-16 creation International DOI Foundation (IDF) 10.25921/snwd-4v72 NOAA National Centers for Environmental Information gov.noaa.nodc:0289357 NCEI Archive Management System 0289357 NOAA National Centers for Environmental Information ncei.info@noaa.gov https://www.ncei.noaa.gov/contact HTTPS NCEI Contact Information Information for contacts at NCEI. information publisher NOAA National Centers for Coastal Ocean Science (NCCOS) https://coastalscience.noaa.gov/ HTTPS NOAA National Centers for Coastal Ocean Science (NCCOS) website Institution web page information resourceProvider Cheryl M. Woodley NOAA National Centers for Coastal Ocean Science (NCCOS) cheryl.woodley@noaa.gov https://coastalscience.noaa.gov/ HTTPS NOAA National Centers for Coastal Ocean Science (NCCOS) website Institution web page information principalInvestigator Cheryl M. Woodley NOAA National Centers for Coastal Ocean Science (NCCOS) cheryl.woodley@noaa.gov https://coastalscience.noaa.gov/ HTTPS NOAA National Centers for Coastal Ocean Science (NCCOS) website Institution web page information pointOfContact Lisa May NOAA National Centers for Coastal Ocean Science (NCCOS) lisa.may@noaa.gov https://coastalscience.noaa.gov/ HTTPS NOAA National Centers for Coastal Ocean Science (NCCOS) website Institution web page information pointOfContact NOAA National Centers for Coastal Ocean Science (NCCOS) NCCOS Data Manager nccos.data@noaa.gov https://coastalscience.noaa.gov/ HTTPS NOAA National Centers for Coastal Ocean Science (NCCOS) website Institution web page information pointOfContact C. Anna Toline National Park Service (NPS) https://www.nps.gov HTTPS National Park Service (NPS) website Institution web page information collaborator Dana E Williams NOAA Southeast Fisheries Science Center Miami Laboratory https://www.fisheries.noaa.gov/about/southeast-fisheries-science-center HTTPS NOAA Southeast Fisheries Science Center Miami Laboratory website Institution web page information collaborator Cynthia Lewis University of South Florida - St. Petersburg, Florida Institute of Oceanography, Keys Marine Laboratory http://www.keysmarinelab.org/ HTTP University of South Florida - St. Petersburg, Florida Institute of Oceanography, Keys Marine Laboratory website Institution web page information collaborator Amanda Moura Coral Restoration Foundation, Key Largo, FL collaborator Eric Sotka Graduate Program in Marine Biology, University of Charleston, Charleston, SC collaborator Parsons, Emily College of Charleston http://www.cofc.edu/ HTTP College of Charleston website Institution web page information author May, Lisa NOAA National Centers for Coastal Ocean Science https://coastalscience.noaa.gov/ HTTPS NOAA National Centers for Coastal Ocean Science (NCCOS) website Institution web page information author Toline, C. Anna National Park Service, Region 2, Charleston, SC https://www.nps.gov HTTPS National Park Service (NPS) website Institution web page information author Sotka, Eric Graduate Program in Marine Biology, University of Charleston, Charleston, SC author Woodley, Cheryl M. NOAA National Centers for Coastal Ocean Science https://coastalscience.noaa.gov/ HTTPS NOAA National Centers for Coastal Ocean Science (NCCOS) website Institution web page information author NOAA Southeast Fisheries Science Center (NMFS/SEFSC) https://www.fisheries.noaa.gov/about/southeast-fisheries-science-center HTTPS NOAA Southeast Fisheries Science Center (NMFS/SEFSC) website Institution web page information contributor NOAA National Centers for Coastal Ocean Science (NCCOS) https://coastalscience.noaa.gov/ HTTPS NOAA National Centers for Coastal Ocean Science (NCCOS) website Institution web page information contributor tableDigital Acropora cervicornis, A. palmata and Orbicella faveolata are important reef-building coral species in the Florida Reef Tract (FRT). These species have experienced alarming declines throughout the FRT, resulting in an increased risk of inbreeding depression and susceptibility to decreased fitness in surviving colonies. Acropora cervicornis, A. palmata and O. faveolata are broadcast spawners, introducing genetic diversity through sexual recombination of gametes during annual spawning events. Successful reproduction during this time is critical for curbing the deleterious effects of inbreeding depression, and in successfully restoring wild colonies to self-sustaining levels of genetic diversity. A critical step in the reproductive cycle of these species is the success of gamete fertilization following mass spawning events. Several abiotic causes of gametic incompatibilities have been reliably observed in these species, and incompatibility between certain genotypes has been shown to occur. This dataset represents the collection of gametes from three coral species following nine spawning events in the Florida Keys during two spawning years (2019 and 2022), reciprocal fertilization trials with gametes from each parent and determined fertilization success for each cross. Additionally, tissue fragments were collected from each A. cervicornis parent, DNA was isolated from the tissue and single nucleotide polymorphism analyses were performed using the Axiom Coral-Algae Genotyping array (Axiom AcropSNP, ThermoFisher Scientific). This data package contains images of coral eggs post fertilization trial and the results in spreadsheet format. The raw A. cervicornis single nucleotide polymorphism (SNP) data are also provided. This study investigates potential factors affecting fertilization success by analyzing fertilization data from reciprocal pairwise crossing experiments carried out for A. cervicornis (4 data sets), A. palmata (2 data sets) and O. faveolata (3 data sets) over two separate years. This project provides the results of fertilization trials conducted in 2019 and 2022 and summarizes the next steps to be taken using single nucleotide polymorphism data from each parent colony in the fertilization trials, to determine if kinship between parents plays a role in fertilization success. We partnered with the Coral Restoration Foundation (Key Largo, FL), Keys Marine Laboratory (Layton, FL), and received funding from the NOAA Coral Reef Conservation Program for this project (#31230). The National Park Service (Florida Bay Interagency Science Center, Key Largo, FL) provided staff housing and research space for this project. Diving and boat support was provided by the NOAA National Marine Fisheries Service, Southeast Regional Office. Funding Agency: NOAA Coral Reef Conservation Program, Project #31230 Funding Agency: NOAA Coral Reef Conservation Program Funding Agency: NOAA National Centers for Coastal Ocean Science completed historicalArchive NOAA National Centers for Environmental Information ncei.info@noaa.gov https://www.ncei.noaa.gov/contact HTTPS NCEI Contact Information Information for contacts at NCEI. information pointOfContact asNeeded https://www.ncei.noaa.gov/access/metadata/landing-page/bin/gfx?id=gov.noaa.nodc:0289357 Preview graphic PNG 0289357 NCEI ACCESSION NUMBER 2024-01-02 publication CORAL theme NODC DATA TYPES THESAURUS camera instrument NODC INSTRUMENT TYPES THESAURUS biological laboratory analyses theme NODC OBSERVATION TYPES THESAURUS NOAA National Centers for Coastal Ocean Science NOAA Southeast Fisheries Science Center dataCentre NODC COLLECTING INSTITUTION NAMES THESAURUS NOAA National Centers for Coastal Ocean Science dataCentre NODC SUBMITTING INSTITUTION NAMES THESAURUS Coral Reef Conservation Program (CRCP) CORAL REEF STUDIES project NODC PROJECT NAMES THESAURUS North Atlantic Ocean place NODC SEA AREA NAMES THESAURUS oceanography theme WMO_CategoryCode 2012-09-15 publication DOC/NOAA/NMFS/SEFSC > Southeast Fisheries Science Center, National Marine Fisheries Service, NOAA, U.S. Department of Commerce DOC/NOAA/NOS/NCCOS > National Centers for Coastal Ocean Science, National Ocean Service, NOAA, U.S. Department of Commerce dataCentre Global Change Master Directory (GCMD) Data Center Keywords 2026 revision 24 Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA) Greenbelt MD https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords HTTPS GCMD Keyword Forum Page Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords information custodian 31230 Genetic relatedness: Does it matter for successful coral sexual reproduction? project CRCP Project Genetic Data Sets > Genotyping Visual Images > Corals theme CoRIS Discovery Thesaurus EARTH SCIENCE > Biosphere > Zoology > Corals > ESA Listed Species EARTH SCIENCE > Biosphere > Zoology > Corals > Reproduction > Sexual Reproduction > Larvae theme CoRIS Theme Thesaurus EARTH SCIENCE > SOLID EARTH > GEOMORPHIC LANDFORMS/PROCESSES > COASTAL LANDFORMS > CORAL REEFS theme Global Change Master Directory (GCMD) Science Keywords 2026 revision 24 Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA) Greenbelt MD https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords HTTPS GCMD Keyword Forum Page Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords information custodian Coastal Change > Restoration theme NCCOS Research Areas Laboratory Experiment theme NCCOS Research Data Types Acropora cervicornis Acropora palmata Orbicella faveolata Percent coral fertilization Single nucleotide polymorphism (SNP) data of Acropora cervicornis theme Provider Keywords CAMERA > CAMERA instrument Global Change Master Directory (GCMD) Instrument Keywords 2026 revision 24 Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA) Greenbelt MD https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords HTTPS GCMD Keyword Forum Page Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords information custodian Axiom Coral-Algae Genotyping array Microscope images instrument Provider Instruments COUNTRY/TERRITORY > United States of America > Florida > Monroe County > Key Largo (25N080W0010) COUNTRY/TERRITORY > United States of America > Florida > Monroe County > Tavernier (24N080W0006) OCEAN BASIN > Atlantic Ocean > North Atlantic Ocean > Florida Reef Tract > Upper Florida Keys > Key Largo (25N080W0010) OCEAN BASIN > Atlantic Ocean > North Atlantic Ocean > Florida Reef Tract > Upper Florida Keys > Tavernier (24N080W0006) place CoRIS Place Thesaurus OCEAN > ATLANTIC OCEAN > NORTH ATLANTIC OCEAN place Global Change Master Directory (GCMD) Location Keywords 2026 revision 24 Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA) Greenbelt MD https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords HTTPS GCMD Keyword Forum Page Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords information custodian U.S. States and Territories > Florida Waterbodies > Atlantic Ocean place NCCOS Regions of Study Florida Reef Tract place Provider Place Names W29GP1 Send2NCEI Submission Package ID accessLevel: public otherRestrictions Cite as: Parsons, Emily; May, Lisa; Toline, C. Anna; Sotka, Eric; Woodley, Cheryl M. (2024). NCCOS Assessment: Fertilization cross results examining genetic relatedness impact on successful reproduction in three species of reef building corals in the Florida Reef Tract in 2019 and 2022 (NCEI Accession 0289357). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://doi.org/10.25921/snwd-4v72. Accessed [date]. Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives. otherRestrictions Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose. Miller, M. W., Baums, I. B., Pausch, R. E., Bright, A. J., Cameron, C. M., Williams, D. E., Moffitt, Z. J., & Woodley, C. M. (2017). Clonal structure and variable fertilization success in Florida Keys broadcast-spawning corals. Coral Reefs, 37(1), 239–249. https://doi.org/10.1007/s00338-017-1651-0 2017-12-08 publication International DOI Foundation (IDF) https://doi.org/10.1007/s00338-017-1651-0 https://doi.org/10.1007/s00338-017-1651-0 HTTPS https://doi.org/10.1007/s00338-017-1651-0 journal article information Miller, M. W. SECORE International author Baums, I. B. author Pausch, R. E. author Bright, A. J. author Cameron, C. M. author Williams, D. E. author Moffitt, Z. J. author Woodley, C. M. author Springer Science and Business Media LLC publisher documentDigital Coral Reefs 37(1) ISSN 0722-4028, ISSN 1432-0975, pp. 239-249 crossReference sciencePaper Baums, I. B., Baker, A. C., Davies, S. W., Grottoli, A. G., Kenkel, C. D., Kitchen, S. A., Kuffner, I. B., LaJeunesse, T. C., Matz, M. V., Miller, M. W., Parkinson, J. E., & Shantz, A. A. (2019). Considerations for maximizing the adaptive potential of restored coral populations in the western Atlantic. Ecological Applications, 29(8). https://doi.org/10.1002/eap.1978 2019-08-19 publication International DOI Foundation (IDF) https://doi.org/10.1002/eap.1978 https://doi.org/10.1002/eap.1978 HTTPS https://doi.org/10.1002/eap.1978 journal article information Baums, Iliana B. Department of Biology Pennsylvania State University University Park Pennsylvania 16803 USA author Baker, Andrew C. Department of Marine Biology and Ecology Rosenstiel School of Marine and Atmospheric Science University of Miami Miami Florida 33149 USA author Davies, Sarah W. Department of Biology Boston University Boston Massachusetts 02215 USA author Grottoli, Andréa G. School of Earth Sciences Ohio State University Columbus Ohio 43210 USA author Kenkel, Carly D. Department of Biological Sciences University of Southern California Los Angeles California 90007 USA author Kitchen, Sheila A. Department of Biology Pennsylvania State University University Park Pennsylvania 16803 USA author Kuffner, Ilsa B. U.S. Geological Survey 600 4th Street S. St. Petersburg Florida 33701 USA author LaJeunesse, Todd C. Department of Biology Pennsylvania State University University Park Pennsylvania 16803 USA author Matz, Mikhail V. Department of Integrative Biology The University of Texas at Austin Austin Texas 78712 USA author Miller, Margaret W. SECORE International Miami Florida 33145 USA author Parkinson, John E. SECORE International Miami Florida 33145 USA author Shantz, Andrew A. Department of Biology Pennsylvania State University University Park Pennsylvania 16803 USA author Wiley publisher documentDigital Ecological Applications 29(8) ISSN 1051-0761, ISSN 1939-5582 crossReference sciencePaper Fogarty, N. D., Vollmer, S. V., & Levitan, D. R. (2012). Weak Prezygotic Isolating Mechanisms in Threatened Caribbean Acropora Corals. PLoS ONE, 7(2), e30486. https://doi.org/10.1371/journal.pone.0030486 2012-02-14 publication International DOI Foundation (IDF) https://doi.org/10.1371/journal.pone.0030486 https://doi.org/10.1371/journal.pone.0030486 HTTPS https://doi.org/10.1371/journal.pone.0030486 journal article information Fogarty, Nicole D. author Vollmer, Steven V. author Levitan, Don R. author Gratwicke, Brian editor Public Library of Science (PLoS) publisher documentDigital PLoS ONE 7(2) ISSN 1932-6203, p. e30486 crossReference sciencePaper Oliver, J., & Babcock, R. (1992). Aspects of the Fertilization Ecology of Broadcast Spawning Corals: Sperm Dilution Effects and in situ Measurements of Fertilization. The Biological Bulletin, 183(3), 409–417. https://doi.org/10.2307/1542017 1992-12 publication International DOI Foundation (IDF) https://doi.org/10.2307/1542017 https://doi.org/10.2307/1542017 HTTPS https://doi.org/10.2307/1542017 journal article information Oliver, J. author Babcock, R. author University of Chicago Press publisher documentDigital The Biological Bulletin 183(3) ISSN 0006-3185, ISSN 1939-8697, pp. 409-417 crossReference sciencePaper Kitchen, S. A., Ratan, A., Bedoya-Reina, O. C., Burhans, R., Fogarty, N. D., Miller, W., & Baums, I. B. (2019). Genomic Variants Among Threatened Acropora Corals. G3 Genes|Genomes|Genetics, 9(5), 1633–1646. https://doi.org/10.1534/g3.119.400125 2019-05-01 publication International DOI Foundation (IDF) https://doi.org/10.1534/g3.119.400125 https://doi.org/10.1534/g3.119.400125 HTTPS https://doi.org/10.1534/g3.119.400125 journal article information Kitchen, Sheila A 208 Mueller Lab, Biology Department author Ratan, Aakrosh Department of Public Health Sciences and Center for Public Health Genomics, University of Virginia, Charlottesville VA 22908 author Bedoya-Reina, Oscar C MRC Functional Genomics Unit, Department of Physiology, Anatomy and Genetics, University of Oxford, South Parks Road, Oxford OX1 3PT, UK author Burhans, Richard Centre for Comparative Genomics and Bioinformatics, The Pennsylvania State University, University Park PA 16802 author Fogarty, Nicole D Department of Marine and Environmental Sciences, Nova Southeastern University, Fort Lauderdale, FL 33314 author Miller, Webb Centre for Comparative Genomics and Bioinformatics, The Pennsylvania State University, University Park PA 16802 author Baums, Iliana B 208 Mueller Lab, Biology Department author Oxford University Press (OUP) publisher documentDigital G3 Genes|Genomes|Genetics 9(5) ISSN 2160-1836, pp. 1633-1646 crossReference sciencePaper Wickham, H. 2016. ggplot2: Elegant Graphics for Data Analysis. Springer-Verlag. https://ggplot2.tidyverse.org 2016 publication https://ggplot2.tidyverse.org HTTPS https://ggplot2.tidyverse.org Navigate directly to the URL for data access and direct download. download crossReference userGuide Wickham, H., R. François, K. Müller. 2022. dplyr: A Grammar of Data Manipulation.https://github.com/tidyverse/dplyr 2022 publication https://github.com/tidyverse/dplyr HTTPS https://github.com/tidyverse/dplyr Data processing software download crossReference userGuide Kassambara, A. 2016. ggpubr: “ggplot2” Based Publication Ready Plots (version 0.5.0) https://CRAN.R-project.org/package=ggpubr 2016 publication https://CRAN.R-project.org/package=ggpubr HTTPS https://CRAN.R-project.org/package=ggpubr Data processing software information crossReference sciencePaper Purcell, S., Neale, B., Todd-Brown, K., Thomas, L., Ferreira, M. A. R., Bender, D., Maller, J., Sklar, P., de Bakker, P. I. W., Daly, M. J., & Sham, P. C. (2007). PLINK: A Tool Set for Whole-Genome Association and Population-Based Linkage Analyses. The American Journal of Human Genetics, 81(3), 559–575. https://doi.org/10.1086/519795 2007-09 publication International DOI Foundation (IDF) https://doi.org/10.1086/519795 https://doi.org/10.1086/519795 HTTPS https://doi.org/10.1086/519795 journal article information Purcell, Shaun author Neale, Benjamin author Todd-Brown, Kathe author Thomas, Lori author Ferreira, Manuel A.R. author Bender, David author Maller, Julian author Sklar, Pamela author de Bakker, Paul I.W. author Daly, Mark J. author Sham, Pak C. author Elsevier BV publisher documentDigital The American Journal of Human Genetics 81(3) ISSN 0002-9297, pp. 559-575 crossReference sciencePaper Chang, C. C., Chow, C. C., Tellier, L. C., Vattikuti, S., Purcell, S. M., & Lee, J. J. (2015). Second-generation PLINK: rising to the challenge of larger and richer datasets. Gigascience, 4(1). https://doi.org/10.1186/s13742-015-0047-8 2015-02-25 publication International DOI Foundation (IDF) https://doi.org/10.1186/s13742-015-0047-8 https://doi.org/10.1186/s13742-015-0047-8 HTTPS https://doi.org/10.1186/s13742-015-0047-8 journal article information Chang, Christopher C 1Complete Genomics, 2071 Stierlin Court, 94043 Mountain View, CA, USA author Chow, Carson C 3Mathematical Biology Section, NIDDK/LBM, National Institutes of Health, 20892 Bethesda, MD, USA author Tellier, Laurent CAM 2BGI Cognitive Genomics Lab, Building No. 11, Bei Shan Industrial Zone, Yantian District, 518083 Shenzhen, China author Vattikuti, Shashaank 3Mathematical Biology Section, NIDDK/LBM, National Institutes of Health, 20892 Bethesda, MD, USA author Purcell, Shaun M 5Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, 02142 Cambridge, MA, USA author Lee, James J 3Mathematical Biology Section, NIDDK/LBM, National Institutes of Health, 20892 Bethesda, MD, USA author Oxford University Press (OUP) publisher documentDigital Gigascience 4(1) ISSN 2047-217X crossReference sciencePaper Manichaikul, A., Mychaleckyj, J. C., Rich, S. S., Daly, K., Sale, M., & Chen, W.-M. (2010). Robust relationship inference in genome-wide association studies. Bioinformatics, 26(22), 2867–2873. https://doi.org/10.1093/bioinformatics/btq559 2010-10-05 publication International DOI Foundation (IDF) https://doi.org/10.1093/bioinformatics/btq559 https://doi.org/10.1093/bioinformatics/btq559 HTTPS https://doi.org/10.1093/bioinformatics/btq559 journal article information Manichaikul, Ani 1 Center for Public Health Genomics, 2Department of Public Health Sciences, Division of Biostatistics and Epidemiology, University of Virginia, Charlottesville, VA, 3Department of Otolaryngology, University of Minnesota, Minneapolis, MN, 4Department of Medicine and 5Department of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA, USA author Mychaleckyj, Josyf C. 1 Center for Public Health Genomics, 2Department of Public Health Sciences, Division of Biostatistics and Epidemiology, University of Virginia, Charlottesville, VA, 3Department of Otolaryngology, University of Minnesota, Minneapolis, MN, 4Department of Medicine and 5Department of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA, USA author Rich, Stephen S. 1 Center for Public Health Genomics, 2Department of Public Health Sciences, Division of Biostatistics and Epidemiology, University of Virginia, Charlottesville, VA, 3Department of Otolaryngology, University of Minnesota, Minneapolis, MN, 4Department of Medicine and 5Department of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA, USA author Daly, Kathy 1 Center for Public Health Genomics, 2Department of Public Health Sciences, Division of Biostatistics and Epidemiology, University of Virginia, Charlottesville, VA, 3Department of Otolaryngology, University of Minnesota, Minneapolis, MN, 4Department of Medicine and 5Department of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA, USA author Sale, Michèle 1 Center for Public Health Genomics, 2Department of Public Health Sciences, Division of Biostatistics and Epidemiology, University of Virginia, Charlottesville, VA, 3Department of Otolaryngology, University of Minnesota, Minneapolis, MN, 4Department of Medicine and 5Department of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA, USA author Chen, Wei-Min 1 Center for Public Health Genomics, 2Department of Public Health Sciences, Division of Biostatistics and Epidemiology, University of Virginia, Charlottesville, VA, 3Department of Otolaryngology, University of Minnesota, Minneapolis, MN, 4Department of Medicine and 5Department of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA, USA author Oxford University Press (OUP) publisher documentDigital Bioinformatics 26(22) ISSN 1367-4811, ISSN 1367-4803, pp. 2867-2873 crossReference sciencePaper WANG, J. (2010). coancestry: a program for simulating, estimating and analysing relatedness and inbreeding coefficients. Molecular Ecology Resources, 11(1), 141–145. https://doi.org/10.1111/j.1755-0998.2010.02885.x 2010-12-13 publication International DOI Foundation (IDF) https://doi.org/10.1111/j.1755-0998.2010.02885.x https://doi.org/10.1111/j.1755-0998.2010.02885.x HTTPS https://doi.org/10.1111/j.1755-0998.2010.02885.x journal article information WANG, JINLIANG author Wiley publisher documentDigital Molecular Ecology Resources 11(1) ISSN 1755-098X, ISSN 1755-0998, pp. 141-145 crossReference sciencePaper Parsons, E. 2022. Investigating Fertilization trends in two species of threatened stony coral in the Florida Keys. Research thesis. The University of Charleston,Charleston, SC. 174 p. 2022 publication https://repository.library.cofc.edu/handle/123456789/5537 HTTPS https://repository.library.cofc.edu/handle/123456789/5537 Research Thesis information crossReference sciencePaper eng; USA utf8 environment oceans biota -81.407 -80.106 24.52328 26.057167 2019-08-22 2022-08-17 NOAA National Centers for Environmental Information +1-301-713-3277 ncei.info@noaa.gov pointOfContact In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media. Contact NCEI for other distribution options and instructions. TIFF PNG JPEG VCF XSLX DOCX PDF 20601.052 https://doi.org/10.25921/snwd-4v72 HTTPS Web browser NCEI Dataset Landing Page Navigate directly to the URL for a descriptive web page with download links. information https://www.ncei.noaa.gov/archive/accession/oas/289357 HTTPS Web browser Descriptive Information Navigate directly to the URL for a descriptive web page with download links. information https://www.ncei.noaa.gov/archive/accession/download/289357 HTTPS Web browser HTTPS Navigate directly to the URL for data access and direct download. download ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0223/0289357/ FTP Any FTP client FTP These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). download dataset NCEI Accession 0289357 v1.1 was published. 2024-03-07T08:55:22Z NCEI Accession 0289357 v1.1 publication https://www.ncei.noaa.gov/archive/accession/0289357/1.1 HTTPS NCEI Accession 0289357 v1.1 published 2024-03-07T08:55:22Z download dataset Parameter or Variable: Percent coral fertilization (calculated); Units: percent; Observation Category: laboratory analysis; Sampling Instrument: Microscope images; Sampling and Analyzing Method: Total embryos in each fertilization vial were removed from the vial via transfer pipet and placed on a glass slide. A photomicrograph was collected from each sample vial. Fertilized and unfertilized embryos were counted from microscope images and percent fertilization was calculated.; Data Quality Method: Ova (fertilized or unfertilized) were scored, then results were quality checked by a second scientist. Embryos which were torn or otherwise misshapen and parent tissue fragments were omitted from the results. Parameter or Variable: Single nucleotide polymorphism (SNP) data of Acropora cervicornis (measured); Units: SNP base-calls; Observation Category: laboratory analysis; Sampling Instrument: Axiom Coral-Algae Genotyping array; Sampling and Analyzing Method: High molecular weight DNA was isolated from cryomilled parent tissue. Nucleic acid samples were submitted to ThermoFisher for SNP analysis as described above (Axiom Coral-Algae Genotyping array, Axiom AcropSNP, ThermoFisher Scientific).; Data Quality Method: SNP data quality was performed as in Kitchen et al. (2019) https://doi.org/10.1534/g3.119.400125 Parameter or Variable: Acropora cervicornis (measured); Units: na; Observation Category: laboratory analysis; Sampling Instrument: microscope images Parameter or Variable: Acropora palmata (measured); Units: na; Observation Category: laboratory analysis; Sampling Instrument: microscope images Parameter or Variable: Orbicella faveolata (measured); Units: na; Observation Category: laboratory analysis; Sampling Instrument: microscope images asNeeded Metadata are developed, maintained and distributed by NCEI. Updates are performed as needed to maintain currentness. NOAA National Centers for Environmental Information custodian camera camera An instrument for recording images.