gov.noaa.nodc:0284052 eng utf8 dataset NOAA National Centers for Environmental Information ncei.info@noaa.gov https://www.ncei.noaa.gov/contact HTTPS NOAA Contact Information Information for contacts at NCEI. information custodian 2026-04-06T18:23:36Z ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data ISO 19115-2:2009(E) NCCOS Assessment: Acute Turbidity Exposures with Port of Miami Sediments Impact Orbicella faveolata Tissue Regeneration, 2019-02-13 to 2022-09-30 (NCEI Accession 0284052) 2023-10-19 publication 2023-10-16 creation International DOI Foundation (IDF) 10.25921/3vf5-n912 NOAA National Centers for Environmental Information gov.noaa.nodc:0284052 NCEI Archive Management System 0284052 NOAA National Centers for Environmental Information ncei.info@noaa.gov https://www.ncei.noaa.gov/contact HTTPS NCEI Contact Information Information for contacts at NCEI. information publisher NOAA National Centers for Coastal Ocean Science (NCCOS) https://coastalscience.noaa.gov/ HTTPS NOAA National Centers for Coastal Ocean Science (NCCOS) website Institution web page information resourceProvider Cheryl M. Woodley NOAA National Centers for Coastal Ocean Science (NCCOS) cheryl.woodley@noaa.gov https://coastalscience.noaa.gov/ HTTPS NOAA National Centers for Coastal Ocean Science (NCCOS) website Institution web page information principalInvestigator Cheryl M. Woodley NOAA National Centers for Coastal Ocean Science (NCCOS) cheryl.woodley@noaa.gov https://coastalscience.noaa.gov/ HTTPS NOAA National Centers for Coastal Ocean Science (NCCOS) website Institution web page information pointOfContact Lisa May Consolidated Safety Services-Dynamac (CSS) lisa.may@noaa.gov https://www.css-inc.com/ HTTPS Consolidated Safety Services-Dynamac (CSS) website Institution web page information pointOfContact NOAA National Centers for Coastal Ocean Science (NCCOS) NCCOS Data Manager nccos.data@noaa.gov https://coastalscience.noaa.gov/ HTTPS NOAA National Centers for Coastal Ocean Science (NCCOS) website Institution web page information pointOfContact Jennifer Moore NOAA Coral Reef Conservation Program (CRCP) https://coralreef.noaa.gov HTTPS NOAA Coral Reef Conservation Program (CRCP) website Institution web page information collaborator Kurtis Gregg NOAA Fisheries (NMFS) https://www.fisheries.noaa.gov/ HTTPS NOAA Fisheries (NMFS) website Institution web page information collaborator Shelby Wedelich Florida State Department of Environmental Protection (FLADEP) http://www.dep.state.fl.us/ HTTP Florida State Department of Environmental Protection (FLADEP) website Institution web page information collaborator Jamie Monty Florida State Department of Environmental Protection (FLADEP) http://www.dep.state.fl.us/ HTTP Florida State Department of Environmental Protection (FLADEP) website Institution web page information collaborator Daryll Joyner Florida State Department of Environmental Protection (FLADEP) http://www.dep.state.fl.us/ HTTP Florida State Department of Environmental Protection (FLADEP) website Institution web page information collaborator Ron Kothera Consolidated Safety Services-Dynamac (CSS) https://www.css-inc.com/ HTTPS Consolidated Safety Services-Dynamac (CSS) website Institution web page information collaborator Jennifer Ness National Institutes for Standards and Technology collaborator Emily Parsons College of Charleston http://www.cofc.edu/ HTTP College of Charleston website Institution web page information collaborator Jeff Guyon NOAA National Centers for Coastal Ocean Science (NCCOS) https://coastalscience.noaa.gov/ HTTPS NOAA National Centers for Coastal Ocean Science (NCCOS) website Institution web page information collaborator May, Lisa A. CSS, Inc., under contract to NOAA National Centers for Coastal Ocean Science https://www.css-inc.com/ HTTPS Consolidated Safety Services-Dynamac (CSS) website Institution web page information author Miller, Carl V. CSS, Inc. https://www.css-inc.com/ HTTPS Consolidated Safety Services-Dynamac (CSS) website Institution web page information author Moffitt, Zachary J. CSS, Inc., under contract to NOAA National Centers for Coastal Ocean Science https://www.css-inc.com/ HTTPS Consolidated Safety Services-Dynamac (CSS) website Institution web page information author Balthis, Len NOAA National Centers for Coastal Ocean Science https://coastalscience.noaa.gov/ HTTPS NOAA National Centers for Coastal Ocean Science (NCCOS) website Institution web page information author Karazsia, Jocelyn NOAA National Marine Fisheries Service, SE Region, Habitat Conservation Division Jocelyn.Karazsia@noaa.gov author Wilber, Pace NOAA National Marine Fisheries Service, SE Region, Habitat Conservation Division author Woodley, Cheryl M. NOAA National Centers for Coastal Ocean Science https://coastalscience.noaa.gov/ HTTPS NOAA National Centers for Coastal Ocean Science (NCCOS) website Institution web page information author NOAA National Centers for Coastal Ocean Science (NCCOS) https://coastalscience.noaa.gov/ HTTPS NOAA National Centers for Coastal Ocean Science (NCCOS) website Institution web page information contributor College of Charleston http://www.cofc.edu/ HTTP College of Charleston website Institution web page information contributor NOAA Coral Reef Conservation Program (CRCP) https://coralreef.noaa.gov HTTPS NOAA Coral Reef Conservation Program (CRCP) website Institution web page information contributor NOAA Fisheries (NMFS) https://www.fisheries.noaa.gov/ HTTPS NOAA Fisheries (NMFS) website Institution web page information contributor tableDigital Preliminary experiments were conducted to determine optimal turbidity dosing systems for coral fragments and the parameters and results of each experiment (10) were reported. Three coral challenge experiments were performed on Orbicella faveolata fragments with varying durations: 48 h, 96 h and 13 days between 2/18/2020 and 3/22/2020. Tissue regeneration (wound healing) was measured on fragments during the exposure periods. Wound images were collected and ImageJ analyses of the wound size were recorded. Sediment particle sizes were measured on 9/28/2022 and a sea urchin embryo development toxicity test (9/1/2022-9/3/2022) was used to evaluate potential toxicity in the sediment used for the coral exposures. This dataset is available to the public for a wide variety of uses including scientific research and analysis. Funding Agency: NOAA Coral Reef Conservation Program, Coral Disease and Health Consortium, Project #1133 Funding Agency: NOAA National Marine Fisheries Service Funding Agency: NOAA National Centers for Coastal Ocean Science completed historicalArchive NOAA National Centers for Environmental Information ncei.info@noaa.gov https://www.ncei.noaa.gov/contact HTTPS NCEI Contact Information Information for contacts at NCEI. information pointOfContact asNeeded https://www.ncei.noaa.gov/access/metadata/landing-page/bin/gfx?id=gov.noaa.nodc:0284052 Preview graphic PNG 0284052 NCEI ACCESSION NUMBER 2023-09-27 publication CORAL pH SALINITY SEDIMENT - GRAIN SIZE turbidity WATER TEMPERATURE theme NODC DATA TYPES THESAURUS camera instrument NODC INSTRUMENT TYPES THESAURUS biological laboratory analyses theme NODC OBSERVATION TYPES THESAURUS College of Charleston NOAA Coral Reef Conservation Program NOAA Fisheries NOAA National Centers for Coastal Ocean Science dataCentre NODC COLLECTING INSTITUTION NAMES THESAURUS NOAA National Centers for Coastal Ocean Science dataCentre NODC SUBMITTING INSTITUTION NAMES THESAURUS CORAL REEF STUDIES project NODC PROJECT NAMES THESAURUS Caribbean Sea Gulf of Mexico place NODC SEA AREA NAMES THESAURUS oceanography theme WMO_CategoryCode 2012-09-15 publication DOC/NOAA/NMFS > National Marine Fisheries Service, NOAA, U.S. Department of Commerce DOC/NOAA/NOS/NCCOS > National Centers for Coastal Ocean Science, National Ocean Service, NOAA, U.S. Department of Commerce dataCentre Global Change Master Directory (GCMD) Data Center Keywords 2026 revision 24 Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA) Greenbelt MD https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords HTTPS GCMD Keyword Forum Page Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords information custodian 31314 Determining a Protective Turbidity Criterion for Coral project CRCP Project Numeric Data Sets > Biology Numeric Data Sets > Water Quality Visual Images > Corals theme CoRIS Discovery Thesaurus EARTH SCIENCE > Biosphere > Zoology > Corals > Coral Condition theme CoRIS Theme Thesaurus EARTH SCIENCE > OCEANS > MARINE SEDIMENTS EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > PH EARTH SCIENCE > OCEANS > OCEAN OPTICS > TURBIDITY EARTH SCIENCE > OCEANS > OCEAN TEMPERATURE > WATER TEMPERATURE EARTH SCIENCE > OCEANS > SALINITY/DENSITY > SALINITY EARTH SCIENCE > SOLID EARTH > GEOMORPHIC LANDFORMS/PROCESSES > COASTAL LANDFORMS > CORAL REEFS theme Global Change Master Directory (GCMD) Science Keywords 2026 revision 24 Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA) Greenbelt MD https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords HTTPS GCMD Keyword Forum Page Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords information custodian Stressor Impacts and Mitigation > Biological Effects of Contaminants and Nutrients theme NCCOS Research Areas Laboratory Experiment theme NCCOS Research Data Types Coral tissue regeneration (wound healing) Seawater turbidity theme Provider Keywords CAMERA > CAMERA instrument Global Change Master Directory (GCMD) Instrument Keywords 2026 revision 24 Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA) Greenbelt MD https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords HTTPS GCMD Keyword Forum Page Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords information custodian Hach model 2100P turbidimeter ImageJ plug-in tool for analyzing wound area digital camera for capturing images instrument Provider Instruments COUNTRY/TERRITORY > United States of America > Florida > Dade County > Miami (25N080W0018) OCEAN BASIN > Atlantic Ocean > North Atlantic Ocean > Florida Reef Tract > Miami (25N080W0018) place CoRIS Place Thesaurus OCEAN > ATLANTIC OCEAN > NORTH ATLANTIC OCEAN > CARIBBEAN SEA OCEAN > ATLANTIC OCEAN > NORTH ATLANTIC OCEAN > GULF OF AMERICA OCEAN > ATLANTIC OCEAN > NORTH ATLANTIC OCEAN > GULF OF MEXICO place Global Change Master Directory (GCMD) Location Keywords 2026 revision 24 Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA) Greenbelt MD https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords HTTPS GCMD Keyword Forum Page Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords information custodian U.S. States and Territories > Florida Waterbodies > Atlantic Ocean place NCCOS Regions of Study Atlantic Ocean place Provider Place Names 56EW32 Send2NCEI Submission Package ID accessLevel: public otherRestrictions Cite as: May, Lisa A.; Miller, Carl V.; Moffitt, Zachary J.; Balthis, Len; Karazsia, Jocelyn; Wilber, Pace; Woodley, Cheryl M. (2023). NCCOS Assessment: Acute Turbidity Exposures with Port of Miami Sediments Impact Orbicella faveolata Tissue Regeneration, 2019-02-13 to 2022-09-30 (NCEI Accession 0284052). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://doi.org/10.25921/3vf5-n912. Accessed [date]. Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives. otherRestrictions Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose. May, L. A., Miller, C. V., Moffitt, Z. J., Balthis, L., Karazsia, J., Wilber, P., & Woodley, C. M. (2023). Acute turbidity exposures with Port of Miami sediments impact Orbicella faveolata tissue regeneration. Marine Pollution Bulletin, 193, 115217. https://doi.org/10.1016/j.marpolbul.2023.115217 2023-08 publication International DOI Foundation (IDF) https://doi.org/10.1016/j.marpolbul.2023.115217 https://doi.org/10.1016/j.marpolbul.2023.115217 HTTPS https://doi.org/10.1016/j.marpolbul.2023.115217 related journal article information May, Lisa A. author Miller, Carl V. author Moffitt, Zachary J. author Balthis, Len author Karazsia, Jocelyn author Wilber, Pace author Woodley, Cheryl M. author Elsevier BV publisher documentDigital Marine Pollution Bulletin 193 ISSN 0025-326X, p. 115217 crossReference sciencePaper Standard Guide for Conducting Static Acute Toxicity Tests with Echinoid Embryos 2006 publication https://www.astm.org/e1563-98r12.html HTTPS Standard Guide for Conducting Static Acute Toxicity Tests with Echinoid Embryos ASTM, 2006. “Standard Guide for Conducting Static Acute Toxicity Tests with Echinoid Embryos”, E 1563–95, American Society for Testing and Materials, West Conshohocken, PA, pp. 1-22. Available from: https://www.astm.org/e1563-98r12.html download crossReference sciencePaper Fisher, E., Fauth, J., Hallock, P., & Woodley, C. (2007). Lesion regeneration rates in reef-building corals Montastraea spp. as indicators of colony condition. Marine Ecology Progress Series, 339, 61–71. https://doi.org/10.3354/meps339061 2007-06-06 publication International DOI Foundation (IDF) https://doi.org/10.3354/meps339061 https://doi.org/10.3354/meps339061 HTTPS https://doi.org/10.3354/meps339061 related journal article information Fisher, EM author Fauth, JE author Hallock, P author Woodley, CM author Inter-Research Science Center publisher documentDigital Mar. Ecol. Prog. Ser. 339 ISSN 0171-8630, ISSN 1616-1599, pp. 61-71 crossReference sciencePaper Gorin, D. R., Cordts, P. R., LaMorte, W. W., & Menzoian, J. O. (1996). The influence of wound geometry on the measurement of wound healing rates in clinical trials. Journal of Vascular Surgery, 23(3), 524–528. https://doi.org/10.1016/s0741-5214(96)80021-8 1996-03 publication International DOI Foundation (IDF) https://doi.org/10.1016/s0741-5214(96)80021-8 https://doi.org/10.1016/s0741-5214(96)80021-8 HTTPS https://doi.org/10.1016/s0741-5214(96)80021-8 related journal article information Gorin, Daniel R. author Cordts, Paul R. author LaMorte, Wayne W. author Menzoian, James O. author Elsevier BV publisher documentDigital Journal of Vascular Surgery 23(3) ISSN 0741-5214, pp. 524-528 crossReference sciencePaper A scale of grade and class terms for clastic sediments 1922 publication https://www.jstor.org/stable/30063207 HTTPS A scale of grade and class terms for clastic sediments Wentworth, C.K., 1922. A scale of grade and class terms for clastic sediments. J. Geol. 30(5):377–392. http://www.jstor.org/stable/30063207 download crossReference sciencePaper eng; USA utf8 environment oceans biota -80.1818346 -80.1449857 25.7660664 25.7812019 2019-02-13 2022-09-30 NOAA National Centers for Environmental Information +1-301-713-3277 ncei.info@noaa.gov pointOfContact In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media. Contact NCEI for other distribution options and instructions. DOCX XSLX PDF TIFF JPEG 2805.412 https://doi.org/10.25921/3vf5-n912 HTTPS Web browser NCEI Dataset Landing Page Navigate directly to the URL for a descriptive web page with download links. information https://www.ncei.noaa.gov/archive/accession/oas/284052 HTTPS Web browser Descriptive Information Navigate directly to the URL for a descriptive web page with download links. information https://www.ncei.noaa.gov/archive/accession/download/284052 HTTPS Web browser HTTPS Navigate directly to the URL for data access and direct download. download ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0219/0284052/ FTP Any FTP client FTP These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). download dataset NCEI Accession 0284052 v1.1 was published. 2023-10-19T23:08:56Z NCEI Accession 0284052 v1.1 publication https://www.ncei.noaa.gov/archive/accession/0284052/1.1 HTTPS NCEI Accession 0284052 v1.1 published 2023-10-19T23:08:56Z download dataset Parameter or Variable: Seawater turbidity (measured); Units: nephelometric turbidity units (NTU); Observation Category: laboratory analysis; Sampling Instrument: Hach model 2100P turbidimeter; Sampling and Analyzing Method: Per manufacturer’s instructions for the turbidity meter, collected a sample in a glass sample vial, cleaned the outside of the sample vial and placed the sample vial in the calibrated instrument. Read sample and returned sample to test vessel.; Data Quality Method: The turbidimeter was calibrated once daily with Hach StablCal formazine standards, per manufacturer’s instructions. Parameter or Variable: Coral tissue regeneration (wound healing) (measured); Units: square millimeters; Observation Category: laboratory analysis; Sampling Instrument: digital camera for capturing images and ImageJ plug-in tool for analyzing wound area; Sampling and Analyzing Method: Coral fragments were removed from the treatment solution and any adhering sediment was removed with gentle aspiration of seawater. Coral fragments were imaged as described in the published manuscript and returned to the treatment. This occurred once daily.; Data Quality Method: The methods are described in the associated manuscript (https://doi.org/10.1016/j.marpolbul.2023.115217) asNeeded Metadata are developed, maintained and distributed by NCEI. Updates are performed as needed to maintain currentness. NOAA National Centers for Environmental Information custodian camera camera An instrument for recording images.