{"@type": "dcat:Dataset", "accessLevel": "public", "bureauCode": ["005:18"], "contactPoint": {"fn": "Robbins, Matthew D.", "hasEmail": "mailto:matthew.robbins@usda.gov"}, "description": "<p dir=\"ltr\">Genome sequence with gene annotation files of the creeping bentgrass cultivar 'Declaration' genome assembly reported in the manuscript \"Haplotype-resolved chromosome-level genome assembly of creeping bentgrass,<i> </i><i>Agrostis stolonifera</i>\". Both haplotype assemblies from the manuscript are combined. The genome sequence is the 'creep_bentv1.0_hap1_hap2.fasta' file which contains both haplotype assemblies from the manuscript combined. The haplotypes are also combined in files for gene annotation (creep_bentv1.0_hap1_hap2.gff), transcript sequences (creep_bentv1.0_hap1_hap2_cds.fasta), protein sequences (creep_bentv1.0_hap1_hap2_pep.fasta), and the transposable element annotation (creep_bentv1.0_hap1_hap2_TE_anno.gff). For usability, additional files are separated by haplotype for the gene annotation (creep_bentv1.0_hap1.gff and creep_bentv1.0_hap2.gff), transcript sequences (creep_bentv1.0_hap1_cds.fasta and creep_bentv1.0_hap2_cds.fasta), and protein sequences (creep_bentv1.0_hap1_pep.fasta and creep_bentv1.0_hap2_pep.fasta).</p>", "distribution": [{"@type": "dcat:Distribution", "accessURL": "https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1317528", "format": "xml", "mediaType": "text/xml", "title": "BioProject: PRJNA1317528 Creeping bentgrass haplotype2 genome assembly"}, {"@type": "dcat:Distribution", "accessURL": "https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1317529", "format": "xml", "mediaType": "text/xml", "title": "BioProject: PRJNA1317529 Creeping bentgrass haplotype 1 genome assembly"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/57776182", "format": "gz", "mediaType": "application/gzip", "title": "creep_bentv1.0_hap1_hap2_pep.fasta.gz"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/57776185", "format": "gz", "mediaType": "application/gzip", "title": "creep_bentv1.0_hap1_hap2_cds.fasta.gz"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/57776191", "format": "gz", "mediaType": "application/gzip", "title": "creep_bentv1.0_hap1_hap2_TE_anno.gff.gz"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/57776575", "format": "gz", "mediaType": "application/gzip", "title": "creep_bentv1.0_hap1_hap2.fasta.gz"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/59759258", "format": "gz", "mediaType": "application/gzip", "title": "creep_bentv1.0_hap1_cds.fasta.gz"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/59759261", "format": "gz", "mediaType": "application/gzip", "title": "creep_bentv1.0_hap1_pep.fasta.gz"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/59759264", "format": "gz", "mediaType": "application/gzip", "title": "creep_bentv1.0_hap2_cds.fasta.gz"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/59759267", "format": "gff", "mediaType": "text/plain", "title": "creep_bentv1.0_hap1.gff"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/59759270", "format": "gz", "mediaType": "application/gzip", "title": "creep_bentv1.0_hap2_pep.fasta.gz"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/59759273", "format": "gff", "mediaType": "text/plain", "title": "creep_bentv1.0_hap2.gff"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/61194175", "format": "gz", "mediaType": "application/gzip", "title": "creep_bentv1.0_hap1_hap2.gff.gz"}], "identifier": "10.15482/USDA.ADC/30081199.v3", "keyword": ["annotation", "polyploidy", "subgenomes", "synteny", "transposable elements"], "license": "https://www.usa.gov/publicdomain/label/1.0/", "modified": "2026-01-22", "programCode": ["005:040"], "publisher": {"@type": "org:Organization", "name": "Agricultural Research Service"}, "temporal": "2021-02-08/2021-02-08", "title": "Data from: Haplotype-resolved chromosome-level genome assembly of creeping bentgrass, <i>Agrostis stolonifera</i>"}