{"@type": "dcat:Dataset", "accessLevel": "public", "bureauCode": ["005:18"], "contactPoint": {"fn": "Islam, Md. Sariful", "hasEmail": "mailto:md.islam@usda.gov"}, "description": "<p>The filtered VCF file of 10501 SNPs from the 432 individuals in this study.  This dataset was used for genome-wide association study (GWAS) and genomic prediction of sugarcane ratooning ability. It was developed using Rapid Genomics Capture-Seq technology. </p>\n<p>Resources in this dataset:</p>\n<ul>\n<li>Resource Title: SNP data for 432 Sugarcane Clones\nFile Name: sugarcane.10501.SNPs<em>.432.Inds</em>.vcf</li>\n</ul>", "distribution": [{"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/43734678", "format": "vcf", "mediaType": "text/plain", "title": "sugarcane.10501.SNPs_.432.Inds_.vcf"}], "identifier": "10.15482/USDA.ADC/1528986", "keyword": ["ARS", "GWAS", "NP301", "candidate gene", "data.gov", "genomic selection", "genomics", "molecular trait association", "ratooning", "sugarcane", "sugarcane production"], "license": "https://www.usa.gov/publicdomain/label/1.0/", "modified": "2025-11-21", "programCode": ["005:040"], "publisher": {"@type": "org:Organization", "name": "Agricultural Research Service"}, "spatial": "{\"type\": \"Polygon\", \"coordinates\": [[[-80.795418480411, 26.602987010735], [-80.795418480411, 26.753646232271], [-80.580224012956, 26.753646232271], [-80.580224012956, 26.602987010735], [-80.795418480411, 26.602987010735]]]}", "temporal": "2016-11-01/2018-11-01", "title": "Data from: A First Look at the Ability to Use Genomic Prediction for Improving Ratooning Ability of Sugarcane"}