{"@type": "dcat:Dataset", "accessLevel": "public", "bureauCode": ["005:00", "005:18"], "contactPoint": {"fn": "Allen, Margaret", "hasEmail": "mailto:meg.allen@usda.gov"}, "description": "<p>12 files (6 sets of paired Illumina FASTQ files) transcriptomes (expressed genes) of the fourth (final) larval and early (white) pupal stages of <em>Solenopsis invicta</em> from Mississippi Delta. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: RNA-seq Larva sample Colony 1.</p> <p>File Name: A01L4_1.zip</p><p>Resource Description: This is the first of the paired samples; the total set includes 3 paired Illumina files from larvae, and 3 paired Illumina files from pupae. Colony 1 samples are from 4th instar larvae: paired Illumina fastq files A01L4_1 and A01L4_2; and white pupae: X01wp_1 and X01wp_2.</p><p>Resource Software Recommended: A01L4_1,url: www.cyverse.org </p></li><br><li><p>Resource Title: RNA-seq Larva sample Colony 1.</p> <p>File Name: A01L4_2.zip</p><p>Resource Description: This is the second of the paired samples for larvae from Colony 1. Colony 1 samples are from 4th instar larvae: paired Illumina fastq files A01L4_1 and A01L4_2; and white pupae: X01wp_1 and X01wp_2.</p><p>Resource Software Recommended: Any assembly program that handles paired Illumina files,url: www.cyverse.org </p></li><br><li><p>Resource Title: RNA-seq pupa sample Colony 1.</p> <p>File Name: X01wp_1.zip</p><p>Resource Description: This is the first of the paired samples. Colony 1 samples are from 4th instar larvae: paired Illumina fastq files A01L4_1 and A01L4_2; and white pupae: X01wp_1 and X01wp_2.</p><p>Resource Software Recommended: Any assembly program that handles paired Illumina files,url: www.cyverse.org </p></li><br><li><p>Resource Title: RNA-seq pupa sample Colony 1..</p> <p>File Name: X01wp_2.zip</p><p>Resource Description: This is the second of the paired samples. Colony 1 samples are from 4th instar larvae: paired Illumina fastq files A01L4_1 and A01L4_2; and white pupae: X01wp_1 and X01wp_2.</p><p>Resource Software Recommended: Any assembly program that can use Illumina paired files,url: www.cyverse.org </p></li><br><li><p>Resource Title: RNA-seq larva sample Colony 2.</p> <p>File Name: B02L4_2.zip</p><p>Resource Description: This is the second of the paired samples from Colony 2.</p><p>Resource Software Recommended: Any assembly program that handles Illumina paired files for input,url: www.cyverse.org </p></li><br><li><p>Resource Title: RNA-seq larva sample Colony 2.</p> <p>File Name: B02L4_1.zip</p><p>Resource Description: This is the first of the paired larva samples. Colony 2 samples include larva paired Illumina files B02L4_1 and B02L4_2, and paired pupa files Y02wp_1 and Y02wp_2.</p><p>Resource Software Recommended: Any assembly program that handles paired Illumina files,url: www.cyverse.org </p></li><br><li><p>Resource Title: RNA-seq pupa sample Colony 2.</p> <p>File Name: Y02wp_1.zip</p><p>Resource Description: This is the first of the paired pupa files. The set includes Y02wp_1 and Y02wp_2.</p><p>Resource Software Recommended: Any assembly program that accepts Illumina paired reads,url: www.cyverse.org </p></li><br><li><p>Resource Title: RNA-seq pupa sample Colony 2.</p> <p>File Name: Y02wp_2.zip</p><p>Resource Description: This is the second of the paired samples; the Colony 2 pupa samples are Y02wp_1 and Y02wp_2.</p><p>Resource Software Recommended: Any assembly program that accepts Illumina paired data files,url: www.cyverse.org </p></li><br><li><p>Resource Title: RNA-seq pupa sample Colony 3.</p> <p>File Name: Z03wp_1.zip</p><p>Resource Description: This is the first of paired sample files: the set includes Z03wp_1 and Z03wp_2.</p></li><br><li><p>Resource Title: RNA-seq pupa sample Colony 3.</p> <p>File Name: Z03wp_2.zip</p><p>Resource Description: This is the second of the paired sample files: the set includes Z03wp_1 and Z03wp_2</p></li><br><li><p>Resource Title: RNA-seq larva sample Colony 3.</p> <p>File Name: C03L4_1.zip</p><p>Resource Description: This is the first of the paired sample files: the set includes C03L4_1 and C03L4_2.</p></li><br><li><p>Resource Title: RNA-seq larva sample Colony 3.</p> <p>File Name: C03L4_2.zip</p><p>Resource Description: This is the second of the paired sample files: the set includes C03L4_1 and C03L4_2</p></li></ul><p></p>", "distribution": [{"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/43634028", "format": "zip", "mediaType": "application/zip", "title": "A01L4_1.zip"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/43634052", "format": "zip", "mediaType": "application/zip", "title": "A01L4_2.zip"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/43634061", "format": "zip", "mediaType": "application/zip", "title": "X01wp_1.zip"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/43634076", "format": "zip", "mediaType": "application/zip", "title": "X01wp_2.zip"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/43634091", "format": "zip", "mediaType": "application/zip", "title": "B02L4_2.zip"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/43634100", "format": "zip", "mediaType": "application/zip", "title": "B02L4_1.zip"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/43634106", "format": "zip", "mediaType": "application/zip", "title": "Y02wp_1.zip"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/43634124", "format": "zip", "mediaType": "application/zip", "title": "Y02wp_2.zip"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/43634133", "format": "zip", "mediaType": "application/zip", "title": "Z03wp_1.zip"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/43634136", "format": "zip", "mediaType": "application/zip", "title": "Z03wp_2.zip"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/43634148", "format": "zip", "mediaType": "application/zip", "title": "C03L4_1.zip"}, {"@type": "dcat:Distribution", "downloadURL": "https://ndownloader.figshare.com/files/43634160", "format": "zip", "mediaType": "application/zip", "title": "C03L4_2.zip"}], "identifier": "10.15482/USDA.ADC/1461500", "keyword": ["NP104"], "license": "https://www.usa.gov/publicdomain/label/1.0/", "modified": "2025-11-22", "programCode": ["005:037"], "publisher": {"@type": "org:Organization", "name": "Agricultural Research Service"}, "spatial": "{\"type\": \"Point\", \"coordinates\": [-91.03344, 33.44734]}", "temporal": "2016-03-11/2016-03-11", "title": "Data from: Differential gene expression in red imported fire ant (Solenopsis invicta) (Hymenoptera: Formicidae) larval and pupal stages"}