{"@type": "dcat:Dataset", "accessLevel": "public", "bureauCode": ["005:18"], "contactPoint": {"fn": "Blackburn, Harvey", "hasEmail": "mailto:harvey.blackburn@usda.gov"}, "description": "<p dir=\"ltr\">Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in \"fastq\" format.</p><p dir=\"ltr\">The National Animal Germplasm Program does not have germplasm for this animal.</p><p dir=\"ltr\">There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the <a href=\"https://data.nal.usda.gov/dataset/angus-sequence-dataset-collection\">Collection Dataset</a>. In the diagram, the two reads would correspond to read 1 and read 3.</p><p dir=\"ltr\">Resources in this dataset:</p><p dir=\"ltr\">tar file containing 14 files. The files are:</p><ul><li>RAPiD-Genomics_F112_CSU_136201_P001_WA06_i5-515_i7-102_S6_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics_F112_CSU_136201_P001_WA06_i5-515_i7-102_S6_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA06-i5-515-i7-102_S142_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA06-i5-515-i7-102_S142_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA06-i5-515-i7-102_S6_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics-F113-CSU-136201-P001-WA06-i5-515-i7-102_S6_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WA06-i5-515-i7-102_S6_L003_R1_001.fastq.gz</li><li>RAPiD-Genomics-F114-CSU-136201-P001-WA06-i5-515-i7-102_S6_L003_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WA06_i5-515_i7-102_S6_L001_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WA06_i5-515_i7-102_S6_L001_R2_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WA06_i5-515_i7-102_S6_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F115_CSU_136201_P001_WA06_i5-515_i7-102_S6_L002_R2_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WA06_i5-515_i7-102_S361_L002_R1_001.fastq.gz</li><li>RAPiD-Genomics_F116_CSU_136201_P001_WA06_i5-515_i7-102_S361_L002_R2_001.fastq.gz</li></ul><p dir=\"ltr\"><br></p>", "distribution": [{"@type": "dcat:Distribution", "downloadURL": "https://app.globus.org/file-manager?origin_id=1e5031de-bb2d-4217-8f35-eda23529faa4&origin_path=%2Fnode33208%2F", "mediaType": "text/html", "title": "https://app.globus.org/file-manager?origin_id=1e5031de-bb2d-4217-8f35-eda23529faa4&origin_path=%2Fnode33208%2F"}], "identifier": "10.15482/USDA.ADC/1529245", "keyword": ["GRIN", "animals", "cryopreservation", "germplasm", "genetic diversity", "DNA sequence", "NP101", "data.gov", "ARS"], "license": "https://www.usa.gov/publicdomain/label/1.0/", "modified": "2026-02-19", "programCode": ["005:040"], "publisher": {"@type": "org:Organization", "name": "Agricultural Research Service"}, "spatial": "{\"type\": \"Point\", \"coordinates\": [-106.56610600168, 41.222307724193]}", "temporal": "2012-01-01/2013-12-31", "title": "Angus Sequence Data: Animal 519-2"}