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Federal
iStitch: GUI-based Image Stitching Software
Department of Agriculture —
GUI-based software coded in PYTHON to automate image stitching and alignment processes from a set of tile images for the high throughput image analytics by... -
Federal
Data from: Legacy genetics of Arachis cardenasii in the peanut crop - v2
Department of Agriculture —
[Note: This version supersedes version 1: https://doi.org/10.15482/USDA.ADC/1520889 Changes in version 2: A new Dataset was added - DataSet1-CardAlleles-iii.xlsx... -
Federal
CottonGen Map Viewer
Department of Agriculture —
MapViewer is a graphical tool for viewing and comparing Gossypium spp. genetic maps. It includes dynamically scrollable maps, correspondence matrices, dot plots,... -
Federal
Uniform Soybean Tests, Northern Region
Department of Agriculture —
The Uniform Soybean Tests, Northern Region, in place since 1941, evaluate yield, disease resistance, and quality traits of public breeding lines from northern states... -
Federal
Data from: Identification of robust yield QTL derived from cultivated emmer for durum wheat improvement
Department of Agriculture —
Phenotypic Data Two durum × cultivated emmer recombinant inbred line (RIL) populations were evaluated for grain yield components under field conditions in North... -
Federal
Legume Information System
Department of Agriculture —
The Legume Information System (legumeinfo.org) is the USDA-ARS genetics and genomics database for legume crops and relatives. Researchers can also submit their data... -
Federal
De novo transcriptome assembly and annotations for wheat curl mite (Aceria tosichella)
Department of Agriculture —
To study the impact of wheat streak mosaic virus on global gene expression in wheat curl mite, we generated a de novo transcriptome assembly using 50 x 50 paired end... -
Federal
Data from: Genotypic characterization of the U.S. peanut core collection
Department of Agriculture —
This collection contains supplementary data for the manuscript "Genotypic characterization of the U.S. Peanut Core Collection", which describes genotyping results for... -
Federal
GrainGenes, the genome database for small-grain crops
Department of Agriculture —
GrainGenes is a popular repository for information about genetic maps, mapping probes and primers, genes, alleles and QTLs for the following crops: wheat, barley, rye... -
Federal
Data from: Efficient imaging and computer vision detection of two cell shapes in young cotton fibers
Department of Agriculture —
Methods Cotton plants were grown in a well-controlled greenhouse in the NC State Phytotron as described previously (Pierce et al, 2019). Flowers were tagged on the... -
Federal
PeanutBase
Department of Agriculture —
PeanutBase (peanutbase.org) is the primary genetics and genomics database for cultivated peanut and its wild relatives. It houses information about genome sequences,... -
Federal
Data from: Development of a versatile resource from 1500 diverse genomes for post-genomics research
Department of Agriculture —
This data set contains 32 million annotated SNPs having an average SNP density of 30 SNPs per kb and 12 non-synonymous SNPs per gene model. These SNPs were identified... -
Federal
Professor: A Motorized Field-Based Phenotyping Cart
Department of Agriculture —
An easy-to-customize, low-cost, low disturbance, motorized, and adjustable proximal sensing cart for field-based high-throughput phenotyping is described. General... -
Federal
IMAP: Image Mapping & Analytics for Phenotyping
Department of Agriculture —
A set of PYTHON programs to implement image processing of ground and aerial images by offering via graphical user interface (GUI) 1) plot-level metrics extraction... -
Federal
CottonGen: Cotton Database Resources
Department of Agriculture —
CottonGen (https://www.cottongen.org) is a curated and integrated web-based relational database providing access to publicly available genomic, genetic and breeding... -
Federal
Data from: BBGD: an online database for blueberry genomic data
Department of Agriculture —
This dataset is supplemental to the article "BBGD: an online database for blueberry genomic data," (2007); it is titled "list of genes printed on microarray slides."... -
Federal
National Plant Germplasm System
Department of Agriculture —
Global food availability and security is based on intensive agricultural production. Over the past century, this intensification has relied heavily on producing crops... -
Federal
National Invertebrate Genetic Resources
Department of Agriculture —
Insects impact American agriculture both as destructive and beneficial organisms. Insect pests, parasites, predators, products, and pollinators are all economically...