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Watford_Novel_application__NPMI_Biomedlit_genesets_usecase_breast_cancer

Metadata Updated: May 2, 2021

We present a novel use of normalized pointwise mutual information (NPMI) to mine biomedical literature for gene associations with biological concepts as represented by Medical Subject Headings (MeSH terms) in PubMed.

This dataset is associated with the following publication: Watford, S., R. Grashow, V. De La Rosa, R. Rudel, K. Paul-Friedman, and M. Martin. Novel application of normalized pointwise mutual information (NPMI) to mine biomedical literature for gene sets associated with disease: Use case in breast carcinogenesis. Computational Toxicology. Elsevier B.V., Amsterdam, NETHERLANDS, 7: 46-57, (2018).

Access & Use Information

Public: This dataset is intended for public access and use. License: See this page for license information.

Downloads & Resources

References

https://doi.org/10.1016/j.comtox.2018.06.003

Dates

Metadata Created Date November 12, 2020
Metadata Updated Date May 2, 2021

Metadata Source

Harvested from EPA ScienceHub

Additional Metadata

Resource Type Dataset
Metadata Created Date November 12, 2020
Metadata Updated Date May 2, 2021
Publisher U.S. EPA Office of Research and Development (ORD)
Maintainer
Identifier https://doi.org/10.23719/1502465
Data Last Modified 2018-10-15
Public Access Level public
Bureau Code 020:00
Schema Version https://project-open-data.cio.gov/v1.1/schema
Harvest Object Id cf823083-fa24-410d-9a4a-2ed31b0a733d
Harvest Source Id 04b59eaf-ae53-4066-93db-80f2ed0df446
Harvest Source Title EPA ScienceHub
License https://pasteur.epa.gov/license/sciencehub-license.html
Program Code 020:095
Publisher Hierarchy U.S. Government > U.S. Environmental Protection Agency > U.S. EPA Office of Research and Development (ORD)
Related Documents https://doi.org/10.1016/j.comtox.2018.06.003
Source Datajson Identifier True
Source Hash d12e68b7728ed5b9bbc8d005518da13e1eb10a6f
Source Schema Version 1.1

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