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OBSOLETE: Coral genetic - Taxonomic and genetic identification of deep-sea corals in bycatch and field surveys -linked to groundfish survey dataset

Metadata Updated: October 18, 2025

Data for this project will reside in the West Coast Groundfish Bottom Trawl Survey Data Base. This proposal relates to a continuation and augmentation of our efforts in creating a DNA sequence repository and voucher collection of coral and sponge species found off the U.S. West Coast, and initial steps toward population-level analysis in deep-sea octocorals and sponges using microsatellite loci. We propose to continue taking genetic samples from specimens collected during the 2012 West Coast Groundfish Bottom Trawl Survey, and continue DNA sequencing of those specimens. We will then link the DNA data to our verified specimens to create a West Coast repository that will serve not only as an essential resource for coral researchers and other stakeholders, but also as a foundation for future research efforts at the NWFSC, aimed at understanding the biogeography and ecology of coral species in these deep-sea communities.

Our primary goals with this funding opportunity are to hire an NRC postdoctoral fellow to work full-time on this project, and to continue to support at-sea specimen collection.

Coral DNA represented by Data Set "Deep Sea Coral voucher sequence dataset".

Access & Use Information

License: No license information was provided. If this work was prepared by an officer or employee of the United States government as part of that person's official duties it is considered a U.S. Government Work.

Downloads & Resources

Dates

Metadata Date October 7, 2025
Metadata Created Date October 19, 2024
Metadata Updated Date October 18, 2025
Reference Date(s) (publication)
Frequency Of Update

Metadata Source

Harvested from NMFS NWFSC

Additional Metadata

Resource Type Dataset
Metadata Date October 7, 2025
Metadata Created Date October 19, 2024
Metadata Updated Date October 18, 2025
Reference Date(s) (publication)
Responsible Party (Point of Contact)
Contact Email
Guid gov.noaa.nmfs.inport:30827
Access Constraints Cite As: Northwest Fisheries Science Center, [Date of Access]: OBSOLETE: Coral genetic - Taxonomic and genetic identification of deep-sea corals in bycatch and field surveys -linked to groundfish survey dataset [Data Date Range], https://www.fisheries.noaa.gov/inport/item/30827., Access Constraints: NA
Bbox East Long -122.2962
Bbox North Lat 47.6549
Bbox South Lat 47.6449
Bbox West Long -122.3062
Coupled Resource
Frequency Of Update
Harvest Object Id 541078fe-3d84-411a-b4de-022a25629b3f
Harvest Source Id ba43549f-8268-499d-bec8-91b164cb168f
Harvest Source Title NMFS NWFSC
Licence NOAA provides no warranty, nor accepts any liability occurring from any incomplete, incorrect, or misleading data, or from any incorrect, incomplete, or misleading use of the data. It is the responsibility of the user to determine whether or not the data is suitable for the intended purpose.
Lineage DNA extraction and sequencing, morphological identifications made, SEM images, QA/QC, phylogenetic analysis
Metadata Language eng
Metadata Type geospatial
Old Spatial {"type": "Polygon", "coordinates": [[[-122.3062, 47.6449], [-122.2962, 47.6449], [-122.2962, 47.6549], [-122.3062, 47.6549], [-122.3062, 47.6449]]]}
Progress
Spatial Data Service Type
Spatial Reference System
Spatial Harvester True
Temporal Extent Begin 2012-02-01
Temporal Extent End 2015-09-28

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