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Nelms_In Silico Guidance_In Vitro ToxCast Assays

Metadata Updated: November 14, 2020

The US EPA Toxicity Forecasting (ToxCast) project has involved the generation of large amount of high throughput in vitro data (Over 4000 chemicals tested in between 100 and 700 assays). This data is generated in a consistent manner, and includes a wide variety of chemicals including industrial and consumer products, food additives, pesticides, and drugs. These chemicals were not chosen because they were expected to be active, resulting in a database containing a balance of positive and negative data points. As such this data is useful for computational model construction. This in vitro data has been used at the EPA and elsewhere in modelling approaches, including computational modelling for specific target binding as biological descriptors for toxicity prediction, and pharmacokinetic modelling of human dose responses. All analyses in the generation of the burst flag hit-call matrix and extraction of chemicals for the targets in this study (AR and GR) were performed using R v3.1.2.

This dataset is associated with the following publication: Allen, T.E., M.D. Nelms, S.W. Edwards, J.M. Goodman, S. Gutsell, and P.J. Russell. In Silico Guidance for In Vitro Androgen and Glucocorticoid Receptor ToxCast Assays. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, USA, 54(12): 7461-7470, (2020).

Access & Use Information

Public: This dataset is intended for public access and use. License: See this page for license information.

Downloads & Resources

References

https://doi.org/10.1021/acs.est.0c01105

Dates

Metadata Created Date November 14, 2020
Metadata Updated Date November 14, 2020

Metadata Source

Harvested from EPA ScienceHub

Additional Metadata

Resource Type Dataset
Metadata Created Date November 14, 2020
Metadata Updated Date November 14, 2020
Publisher U.S. EPA Office of Research and Development (ORD)
Maintainer
Identifier https://doi.org/10.23719/1503080
Data Last Modified 2019-06-17
Public Access Level public
Bureau Code 020:00
Schema Version https://project-open-data.cio.gov/v1.1/schema
Harvest Object Id f99ee4d8-b0d4-40e6-b985-bf39de3c8803
Harvest Source Id 04b59eaf-ae53-4066-93db-80f2ed0df446
Harvest Source Title EPA ScienceHub
License https://pasteur.epa.gov/license/sciencehub-license.html
Program Code 020:095
Publisher Hierarchy U.S. Government > U.S. Environmental Protection Agency > U.S. EPA Office of Research and Development (ORD)
Related Documents https://doi.org/10.1021/acs.est.0c01105
Source Datajson Identifier True
Source Hash ce967e85ada307be9a75f7adffad96e8fce8a61b
Source Schema Version 1.1

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