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    • Manual annotations of Rhyzopertha dominica genome assembly RdoDt3_Drdd8_decomES

    Metadata Updated: April 21, 2025

    This dataset contains manual annotations from Rhyzopertha dominica community curators, based on genome assembly RdoDt3_Drdd8_decomES.fasta.gz. These annotations are direct exports from Apollo 2.6 (https://doi.org/10.5281/zenodo.5015109), hosted by the i5k Workspace@NAL (https://i5k.nal.usda.gov/). Manual annotations are temporary and will be reviewed by the i5k Workspace@NAL and submitted to NCBI's GenBank database after review. Resources in this dataset:Resource Title: Manual annotations of Rhyzopertha dominica genome assembly RdoDt3_Drdd8_decomES. File Name: Rhyzopertha-dominica-manual-annotations-presubmission.tar.gzResource Description: The files contained within this directory are manual annotations from the Rhyzopertha dominica genome assembly RdoDt3_Drdd8_decomES.fasta.gz. These annotations are direct exports from Apollo 2.6, hosted by the i5k Workspace@NAL. Manual annotations are temporary and will be reviewed by the i5k Workspace@NAL and submitted to NCBI's GenBank database after review.

    Annotations.cdna.fasta.gz: cDNA sequences of the manual annotations Annotations.cds.fasta.gz: coding (CDS) sequences of the manual annotations Annotations.gff3.gz: manual annotations in the GFF3 format. Annotations.peptide.fasta.gz: polypeptide sequences of the manual annotations. RdoDt3_Drdd8_decomES.fasta.gz: The genome assembly that the manual annotations are based on.

    Access & Use Information

    Public: This dataset is intended for public access and use. License: Creative Commons Attribution Share-Alike

    Downloads & Resources

    Dates

    Metadata Created Date March 30, 2024
    Metadata Updated Date April 21, 2025

    Metadata Source

    Harvested from USDA JSON

    Other Data Resources

    Additional Metadata

    Resource Type Dataset
    Metadata Created Date March 30, 2024
    Metadata Updated Date April 21, 2025
    Publisher Agricultural Research Service
    Maintainer
    Identifier 10.15482/USDA.ADC/1524749
    Data Last Modified 2024-02-16
    Public Access Level public
    Bureau Code 005:18
    Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
    Schema Version https://project-open-data.cio.gov/v1.1/schema
    Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
    Harvest Object Id c329a30f-2f5d-433b-9aeb-83b06bb071a6
    Harvest Source Id d3fafa34-0cb9-48f1-ab1d-5b5fdc783806
    Harvest Source Title USDA JSON
    License https://creativecommons.org/licenses/by-sa/4.0/
    Old Spatial {"type": "Point", "coordinates": -96.6297555, 39.190887}
    Program Code 005:040
    Source Datajson Identifier True
    Source Hash cd22b0e1377df8bddbd3dc82c3b7bdf401e5fdaf580ac2521849e77ebe3f5519
    Source Schema Version 1.1
    Spatial {"type": "Point", "coordinates": -96.6297555, 39.190887}
    Temporal 2022-03-04/2022-03-04

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