This dataset is a point shapefile containing water-depth points collected during a sedimention survey of Lago Guayabal conducted during the period December 11- December 14, 2017 by the Puerto Rico office of the Caribbean-Florida Water Science Center of the U.S. Geological Survey (USGS). The goals of the survey were to determine reservoir infill sedimentation rates, generate a bathymetric map of the reservoir, and create a stage-volume relation. More than 270,000 water-depth points were surveyed along 60 navigation lines used in previous sedimentation surveys (Soler-Lopez, 2003, 2007, 2008). All water-depth data were collected using a Teledyne-Odom Echotrac CVM depth sounder coupled to a Global Positioning System (GPS). Esri ArcGIS software, version 10.5 (Environmental Systems Research Institute, 2017), was used to edit the depth data and create a triangulated irregular network (TIN) model, from which bathymetric contours and a stage-volume relation were generated.