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Data from: The effect of soil texture and pH on Meloidogyne hapla and Mesocriconema xenoplax parasitism in vineyard soils

Metadata Updated: April 21, 2025

Data set one: on the population density of Meloidogyne hapla after inoculated on varying soil pH and soil texture during the study. Data set one was used for calculations and associated analyses of the parameters presented in Fig 1. Data set two: on the population density of Mesocriconema xenoplax after inoculated on varying soil pH and soil texture during the study, as well as associated plant metrics at harvest. Data set two was used for calculations and associated analyses of the parameters presented in Fig 2. Data set three: on the population density of Meloidogyne hapla and Mesocriconema xenoplax after inoculated on varying soil pH and soil texture during the study and associated plant metrics at harvest. Data set three was used for calculations and associated analyses of the parameters presented in Fig 3, and 4. Data set four: Root parameters measured using RhizoVision Explorer v2.0.3 on K-means clustered binary root mask images. Data set four was used for calculations and analysis of the parameters presented in Fig 5 and 6. Data set five: Measured soil parameters. Data set five was used for calculations and associated analyses in Table 1. *Note: Soil type is referred to as 'site' in all data sets. 'Site' was renamed to 'type' in the associated publication. Resources in this dataset:

Resource Title: Data set 1: M. hapla File Name: M. hapla - soil texture and pH on M. hapla and M. xenoplax.csv

Resource Title: Data set 2: M. xenoplax File Name: M. xenoplax - soil texture and pH on M. hapla and M. xenoplax.csv

Resource Title: Data set 3: Nematode and host tomato metrics from harvest File Name: Harvest - soil texture and pH on M. hapla and M. xenoplax.csv

Resource Title: Data set 4: Root measurements collected using RhizoVision Explorer v2.0.3 on tomato root images File Name: Root images - soil texture and pH on M. hapla and M. xenoplax.csv Resource Description: This data set was generated from RhizoVision Explorer v2.0.3, after preprocessing of root images. All root treatment data is the total of three seminal roots collected per treatment replicate; one from the top, middle, and bottom of the root mass.

Resource Title: Data set 5: Soil parameter data File Name: Soil parameters - soil texture and pH on M. hapla and M. xenoplax.csv Resource Description: There are only two repeats (n=2) for each treatment combination (nematode x site x pH), one from each experimental repeat (August, October).

Resource Title: Data Dictionary for all data sets File Name: Data Dictionary - soil texture and pH on M. hapla and M. xenoplax.csv Resource Description: Data Dictionary for all data sets for soil pH and texture effects on Meloidogyne hapla and Mesocriconema xenoplax, as well as host tomato metrics and soil metrics.

Access & Use Information

Public: This dataset is intended for public access and use. License: us-pd

Downloads & Resources

Dates

Metadata Created Date April 10, 2024
Metadata Updated Date April 21, 2025

Metadata Source

Harvested from USDA JSON

Additional Metadata

Resource Type Dataset
Metadata Created Date April 10, 2024
Metadata Updated Date April 21, 2025
Publisher Agricultural Research Service
Maintainer
Identifier 10.15482/USDA.ADC/1529198
Data Last Modified 2024-02-14
Public Access Level public
Bureau Code 005:18
Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
Schema Version https://project-open-data.cio.gov/v1.1/schema
Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
Harvest Object Id d5b8b8f4-4efa-461c-aa8c-2a1a9c05798d
Harvest Source Id d3fafa34-0cb9-48f1-ab1d-5b5fdc783806
Harvest Source Title USDA JSON
License https://www.usa.gov/publicdomain/label/1.0/
Old Spatial {"type": "MultiPoint", "coordinates": -119.741048, 45.882391, -123.407291, 44.340528}
Program Code 005:040
Source Datajson Identifier True
Source Hash dac70fda038e2795dafd6b8cba07a1af9ba82813eb7a05c3f40c84f6b4e8f27f
Source Schema Version 1.1
Spatial {"type": "MultiPoint", "coordinates": -119.741048, 45.882391, -123.407291, 44.340528}
Temporal 2022-07-07/2022-10-04

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