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Data from: Ploidy determination of buffel grass accessions in the USDA National Plant Germplasm System collection by flow cytometry

Metadata Updated: April 21, 2025

Buffel grass (Cenchrus ciliaris L. syn. Pennisetum ciliare (L.) Link) is an economically important warm-season perennial used primarily as a forage and range grass in many of the drier regions throughout the subtropics and tropics. Because buffel grass has excellent drought tolerance combined with desirable forage traits, it is an important forage and range grass in parts of Africa, including South Africa. It was introduced into many of the arid subtropical regions of the world, primarily Australia, North America, and South America, and today the species is grown on more than 50 million ha worldwide. Knowledge of the ploidy, meiotic behavior, and fertility of the plants used in hybridization programs became important because success depended upon using meiotically stable parental lines with compatible chromosome numbers. Little is known about the chromosome number of the buffel grass accessions in the USDA National Plant Germplasm System (NPGS) because the species has small chromosomes, that makes them difficult to count using traditional cytological methods. The DNA content of 568 accessions of buffel grass in the USDA National Plant Germplasm System was determined through flow cytometry to predict their ploidy levels. Based on DNA content, 308 accessions were determined as tetraploids with 36 chromosomes, 139 as pentaploids with 45 chromosomes, 20 as hexaploids with 54 chromosomes, two as septaploids with 63 chromosomes, and 99 as aneuploids. Chromosome counts of selected plants confirmed ploidy levels from DNA findings. Chromosome number of euploid plants could be predicted from the DNA data. The findings from this investigation reveal that the accessions in the buffel grass collection consist of a wide range of cytotypes, including polyploids and aneuploids with varying chromosome numbers. This demonstrates the amount of chromosomal diversity that occurs within the species and this collection. Grass breeders who use the buffel grass germplasm in the NPGS in their breeding programs should ensure that they know the chromosome number of the material requested. The predicted ploidy levels in Supplementary Table 1 will provide that information to the breeders. Resources in this dataset:Resource Title: Supplementary Table 1. DNA content and ploidy levels of buffel grass accessions in the USDA National Plant Germplasm System (csv). File Name: Supp-Table-1-buffel-ploidy.csvResource Description: Grass breeders who use the buffel grass germplasm in the NPGS in their breeding programs should ensure that they know the chromosome number of the material requested. The predicted ploidy levels in Supplementary Table 1 will provide that information to the breeders.Resource Title: Data Dictionary. File Name: Supp-Table-1-buffel-ploidy-DataDictionary.csvResource Description: Defines variables for buffel grass accession ploidy/country of origin table.

Access & Use Information

Public: This dataset is intended for public access and use. License: Creative Commons Attribution

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Dates

Metadata Created Date March 30, 2024
Metadata Updated Date April 21, 2025

Metadata Source

Harvested from USDA JSON

Additional Metadata

Resource Type Dataset
Metadata Created Date March 30, 2024
Metadata Updated Date April 21, 2025
Publisher Agricultural Research Service
Maintainer
Identifier 10.15482/USDA.ADC/1529196
Data Last Modified 2024-02-13
Public Access Level public
Bureau Code 005:18
Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
Schema Version https://project-open-data.cio.gov/v1.1/schema
Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
Harvest Object Id f7326a51-038b-4078-91a2-bbed8214f8da
Harvest Source Id d3fafa34-0cb9-48f1-ab1d-5b5fdc783806
Harvest Source Title USDA JSON
License https://creativecommons.org/licenses/by/4.0/
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Program Code 005:040
Source Datajson Identifier True
Source Hash 9e895038e49de0c58f7d0deb9cb70b5b34cd633e4d58eecb13343703488b2aee
Source Schema Version 1.1
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Temporal 2012-03-01/2012-03-01

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