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Cryptobiota metabarcoding using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across Timor Leste from 2012 to 2014

Metadata Updated: March 16, 2024

The data described here includes cytochrome oxidase I (COI) DNA metabarcoding data collected from Autonomous Reef Monitoring Structures (ARMS). ARMS were deployed by the NOAA Pacific Islands Fisheries Science Center (PIFSC), Ecosystem Sciences Division (formerly the Coral Reef Ecosystem Division) in Timor Leste under USAID Timor Leste. Developed in collaboration with the Census of Marine Life (CoML) Census of Coral Reef Ecosystems (CReefs), ARMS were designed to mimic the structural complexity of a reef and attract/collect colonizing marine invertebrates. The key innovation of the ARMS method is that biodiversity is sampled over precisely the same surface area in the exact same manner.

These data were gathered at specific reef sites across Timor-Leste. ARMS units were set-up, deployed and recovered as described in the ARMS record in the related items section below. After ARMS were disassembled, different size fractions of samples and plate scrapings were preserved in ethanol for metabarcoding.

Access & Use Information

License: No license information was provided. If this work was prepared by an officer or employee of the United States government as part of that person's official duties it is considered a U.S. Government Work.

Downloads & Resources

Dates

Metadata Date February 29, 2024
Metadata Created Date February 14, 2022
Metadata Updated Date March 16, 2024
Reference Date(s) January 1, 2021 (creation), May 5, 2021 (revision), 2017 (publication)
Frequency Of Update notPlanned

Metadata Source

Harvested from NMFS PIFSC

Additional Metadata

Resource Type Dataset
Metadata Date February 29, 2024
Metadata Created Date February 14, 2022
Metadata Updated Date March 16, 2024
Reference Date(s) January 1, 2021 (creation), May 5, 2021 (revision), 2017 (publication)
Responsible Party (Custodian)
Contact Email
Guid gov.noaa.nmfs.inport:64540
Access Constraints Cite As: Pacific Islands Fisheries Science Center, [Date of Access]: Cryptobiota metabarcoding using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across Timor Leste from 2012 to 2014 [Data Date Range], https://www.fisheries.noaa.gov/inport/item/64540., Access Constraints: None, Use Constraints: Please cite NOAA Coral Reef Ecosystem Program (CREP) when using the data. Suggested citation: Coral Reef Ecosystem Program; Pacific Islands Fisheries Science Center (2017). Assessing cryptic reef diversity of colonizing marine invertebrates using Autonomous Reef Monitoring Structures (ARMS) deployed at coral reef sites in Timor-Leste from 2012 to 2014. NOAA's National Center for Environmental Information, https://www.fisheries.noaa.gov/inport/item/46159., Distribution Liability: While every effort has been made to ensure that these data are accurate and reliable within the limits of the current state of the art, NOAA cannot assume liability for any damages caused by errors or omissions in the data, nor as a result of the failure of the data to function on a particular system. NOAA makes no warranty, expressed or implied, nor does the fact of distribution constitute such a warranty.
Bbox East Long 127.31222
Bbox North Lat -8.22438
Bbox South Lat -8.85321
Bbox West Long 125.01319
Coupled Resource
Frequency Of Update notPlanned
Harvest Object Id 728b6956-011a-483f-9fe9-99e374a6e423
Harvest Source Id c0beac72-5f43-4455-8c33-1b345fbc2dfe
Harvest Source Title NMFS PIFSC
Licence NOAA provides no warranty, nor accepts any liability occurring from any incomplete, incorrect, or misleading data, or from any incorrect, incomplete, or misleading use of the data. It is the responsibility of the user to determine whether or not the data is suitable for the intended purpose.
Lineage Autonomous Reef Monitoring Structures (ARMS) are assembled, deployed, recovered, and processed as described in the ARMS record in the related items section below. The sessile organisms, the 100 um and 500 um motile fractions, as well as plate scrapings, undergo DNA metabarcoding using the COI gene as the amplicon marker.
Metadata Language eng
Metadata Type geospatial
Old Spatial {"type": "Polygon", "coordinates": [[[125.01319, -8.85321], [127.31222, -8.85321], [127.31222, -8.22438], [125.01319, -8.22438], [125.01319, -8.85321]]]}
Progress underDevelopment
Spatial Data Service Type
Spatial Reference System
Spatial Harvester True
Temporal Extent Begin 2012-10-15
Temporal Extent End 2014-10-09

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