37 datasets found
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Federal
Comparing Transcriptomic Points of Departure to Apical Effect Concentrations For Larval Fathead Minnow Exposed to Chemicals with Four Different Modes Of Action
U.S. Environmental Protection Agency —
Data for "Flynn, K., Le, M., Hazemi, M. et al. Comparing Transcriptomic Points of Departure to Apical Effect Concentrations For Larval Fathead Minnow Exposed to... -
Federal
Investigation of peroxisome proliferator-activated receptor delta (ppard)-dependent visual startle response hyperactivity in larval zebrafish exposed to structurally similar Per- and Polyfluoroalkyl Substances (PFAS)
U.S. Environmental Protection Agency —
PFHxS, PFOS, and Heptachlor RNA sequencing data. Portions of this dataset are inaccessible because: The files are too large. They can be accessed through the... -
Federal
Differential effects of four nano and one micro CeO2 particles on HepG2 cells
U.S. Environmental Protection Agency —
Differential expressed gene lists and altered canonical pathways in HepG2 cells after CeO2 particle treatment. This dataset is associated with the following... -
Federal
combined canonical pathways for nano Cu and CuCl2 from IPA. data for table 2, 3,4 ,5
U.S. Environmental Protection Agency —
canonical pathways for each concentration of nano Cu and CuCl2 after upload the DEG lists of each concentration to Ingenuity Pathway Analysis -
Federal
High-Throughput Transcriptomics Platform for Screening Environmental Chemicals
U.S. Environmental Protection Agency —
We screened 44 chemicals in MCF7 cells in concentration response and generated HTTr data using the TempO-Seq hWTv1 assay. First, we provide an outline of the quality... -
Federal
Data from: Genomic structural differences between cattle and River Buffalo identified through comparative genomic and transcriptomic analysis
Department of Agriculture —
Water buffalo (Bubalus bubalis L.) is an important livestock species worldwide. Like many other livestock species, water buffalo lacks high quality and continuous... -
Federal
Exploring the Effects of Experimental Parameters and Data Modeling Approaches on In Vitro Transcriptomic Point-of-Departure Estimates
U.S. Environmental Protection Agency —
Dataset for 'Exploring the Effects of Experimental Parameters and Data Modeling Approaches on In Vitro Transcriptomic Point-of-Departure Estimates' published in... -
Federal
Evaluating adaptive stress response gene signatures using transcriptomics- Data for Figures 1-4
U.S. Environmental Protection Agency —
The construction of SRP consensus signatures sets was completed in three steps. First, we constructed consensus signatures by merging and pruning relevant gene sets... -
Federal
Dataset for 'From vision toward best practices: Evaluating in vitro transcriptomic points of departure for application in risk assessment using a uniform workflow'
U.S. Environmental Protection Agency —
Data for Reardon AJF, et al., From vision toward best practices: Evaluating in vitro transcriptomic points of departure for application in risk assessment using a... -
Federal
Rapid Effects of the Aromatase Inhibitor Fadrozole on Steroid Production and Gene Expression in the Ovary of Female Fathead Minnows (Pimephales promelas)
U.S. Environmental Protection Agency —
Aromatase inhibition is one of the chemical modes of action of concern to EPA's Endocrine Disruptor Screening Program (EDSP). In vitro bioassays that can detect... -
Federal
Chemical, physical, profile and laboratory analysis oceanographic data collected aboard the Ferrel in the Gulf of Mexico from 2010-07-15 to 2010-07-23 in response to the Deepwater Horizon Oil Spill event (NCEI Accession 0069060)
National Oceanic and Atmospheric Administration, Department of Commerce —
Chemical, physical, profile and laboratory analysis oceanographic data were collected aboard the Ferrel in the Gulf of Mexico from 2010-07-15 to 2010-07-23 in... -
Federal
Differential transcriptomic alterations in nasal versus lung tissue of acrolein-exposed rats
U.S. Environmental Protection Agency —
Frontiers in Toxicology paper, Differential transcriptomic alterations in nasal versus lung tissue of acrolein-exposed rats, 2023 Alewel DI. This dataset is... -
Federal
Data submission for A-gf27
U.S. Environmental Protection Agency —
Biomarker genes used to predict AhR activity; accession numbers of microarray datasets used in the study. This dataset is associated with the following publication:... -
Federal
Data submission for A-d25f
U.S. Environmental Protection Agency —
Includes 1) list of genes in the STAT5b biomarker and 2) list of accession numbers for microarray datasets used in study. This dataset is associated with the... -
Federal
Differential expressed mRNA and microRNA from expression profiling by RNA and small RNA sequencing
U.S. Environmental Protection Agency —
data was from HepG2 cells treated with nano-silver particles using silver nitrate as negative controls. Differentially expressed messenger RNA and microRNA were... -
Federal
Data submission for A-p8dg
U.S. Environmental Protection Agency —
Accession numbers for microarray datasets used in Oshida et al. Chemical and Hormonal Effects on STAT5b-Dependent Sexual Dimorphism of the Liver Transcriptome. PLoS... -
Federal
Using the Daphnia magna Transcriptome to Distinguish Water Source: Wetland and Stormwater Case Studies
U.S. Environmental Protection Agency —
A major challenge in ecotoxicology is accurately and sufficiently measuring chemical exposures and biological effects given the presence of complex and dynamic... -
Federal
Dataset for "Persistent gene expression and DNA methylation alterations linked to carcinogenic effects of dichloroacetic acid'
U.S. Environmental Protection Agency —
These spreadsheets contain the underlying data, calculations, and R code for the figures of the manuscript "Persistent gene expression and DNA methylation alterations... -
Federal
Chemical, physical, profile and laboratory analysis oceanographic data collected aboard the Ferrel in the Gulf of Mexico from 2010-07-25 to 2010-07-30 in response to the Deepwater Horizon Oil Spill event (NCEI Accession 0069061)
National Oceanic and Atmospheric Administration, Department of Commerce —
Chemical, physical, profile and laboratory analysis oceanographic data were collected aboard the Ferrel in the Gulf of Mexico from 2010-07-25 to 2010-07-30 in...
37 datasets found