17 datasets found
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Federal
PeanutBase
Department of Agriculture —
PeanutBase (peanutbase.org) is the primary genetics and genomics database for cultivated peanut and its wild relatives. It houses information about genome sequences,... -
Federal
Data from: A High-Quality Genome Assembly from a Single, Field-collected Spotted Lanternfly (Lycorma delicatula) using the PacBio Sequel II System
Department of Agriculture —
A high-quality reference genome is an essential tool for applied and basic research on arthropods. Long-read sequencing technologies may be used to generate more... -
Federal
CottonGen JBrowse
Department of Agriculture —
CottonGen has an instance of the JBrowse genome browser for viewing genome data. A list of the genomes available in CottonGen can be accessed by clicking the JBrowse... -
Federal
Data from: Response to selection for parasitism of a sub-optimal, low-preference host in an aphid parasitoid
Department of Agriculture —
Risks of post-introduction evolution in insects introduced to control invasive pests have been discussed for some time, but little is known about responses to... -
Federal
Data from: A First Look at the Ability to Use Genomic Prediction for Improving Ratooning Ability of Sugarcane
Department of Agriculture —
The filtered VCF file of 10501 SNPs from the 432 individuals in this study. This dataset was used for genome-wide association study (GWAS) and genomic prediction of... -
Federal
Maize Genetics Cooperation Stock Center Catalog of Stocks
Department of Agriculture —
The Maize Genetics Cooperation Stock Center is operated by USDA/ARS, located at the University of Illinois, Urbana/Champaign, and integrated with the National Plant... -
Federal
BBGD454: an Online Database for Blueberry Genomic Data Transcriptome analysis of Blueberry using 454 EST sequencing
Department of Agriculture —
NOTE: This dataset is no longer publicly available. This database houses over 500,000 sequences that were generated and assembled into approximately 15,000 contigs,... -
Federal
Data from: BBGD: an online database for blueberry genomic data
Department of Agriculture —
This dataset is supplemental to the article "BBGD: an online database for blueberry genomic data," (2007); it is titled "list of genes printed on microarray slides."... -
Federal
Data from: Development of a versatile resource from 1500 diverse genomes for post-genomics research
Department of Agriculture —
This data set contains 32 million annotated SNPs having an average SNP density of 30 SNPs per kb and 12 non-synonymous SNPs per gene model. These SNPs were identified... -
Federal
Data from: "Genome report - chromosome-scale genome assembly of the Olive fly Bactrocera oleae (Diptera-Tephritidae)"
Department of Agriculture —
The olive fruit fly, Bactrocera oleae (Rossi) (Diptera: Tephritidae), is a specialist of fruits of the genus Olea and is a major pest of commercial olives due to... -
Federal
Data from: Construction of a High-Density American Cranberry (Vaccinium macrocarpon Ait.) Composite Map Using Genotyping-by-Sequencing for Multi-pedigree Linkage Mapping
Department of Agriculture —
The American cranberry (Vaccinium macrocarpon Ait.) is a recently domesticated, economically important, fruit crop with limited molecular resources. New genetic... -
Federal
Data from: The assembled transcriptome of the adult horn fly, Haematobia irritans
Department of Agriculture —
The horn fly, Haematobia irritans irritans (Linnaeus, 1758; Diptera: Muscidae), a hematophagous external parasite of cattle, causes considerable economic losses to... -
Federal
Data from: Genomic structural differences between cattle and River Buffalo identified through comparative genomic and transcriptomic analysis
Department of Agriculture —
Water buffalo (Bubalus bubalis L.) is an important livestock species worldwide. Like many other livestock species, water buffalo lacks high quality and continuous... -
Federal
SoyBase and the Soybean Breeder's Toolbox
Department of Agriculture —
SoyBase is a repository for genetics, genomics and related data resources for soybean. It contains current genetic, physical and genomic sequence maps integrated with...
17 datasets found